Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
KRT2P35908 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT2P35908 GCOM2-201ENST00000509133 1104 ntBASIC17.12■□□□□ 0.33
KRT2P35908 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.12■□□□□ 0.33
KRT2P35908 AC078819.1-201ENST00000547454 765 ntBASIC17.12■□□□□ 0.33
KRT2P35908 AC012085.1-201ENST00000548270 765 ntBASIC17.12■□□□□ 0.33
KRT2P35908 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.12■□□□□ 0.33
KRT2P35908 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.12■□□□□ 0.33
KRT2P35908 AC138951.2-201ENST00000623455 1161 ntBASIC17.12■□□□□ 0.33
KRT2P35908 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT2P35908 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT2P35908 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT2P35908 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT2P35908 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT2P35908 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KRT2P35908 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT2P35908 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT2P35908 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT2P35908 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT2P35908 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT2P35908 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
KRT2P35908 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT2P35908 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT2P35908 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT2P35908 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
KRT2P35908 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT2P35908 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
KRT2P35908 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT2P35908 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT2P35908 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT2P35908 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT2P35908 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT2P35908 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KRT2P35908 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT2P35908 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
KRT2P35908 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KRT2P35908 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
KRT2P35908 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
KRT2P35908 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.11■□□□□ 0.33
KRT2P35908 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.11■□□□□ 0.33
KRT2P35908 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.11■□□□□ 0.33
KRT2P35908 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.11■□□□□ 0.33
KRT2P35908 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.11■□□□□ 0.33
KRT2P35908 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KRT2P35908 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 MRPL37P1-201ENST00000592451 1337 ntBASIC17.11■□□□□ 0.33
KRT2P35908 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT2P35908 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 AP000593.2-201ENST00000542775 1433 ntBASIC17.11■□□□□ 0.33
KRT2P35908 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT2P35908 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT2P35908 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT2P35908 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT2P35908 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.1■□□□□ 0.33
KRT2P35908 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
KRT2P35908 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
KRT2P35908 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT2P35908 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KRT2P35908 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT2P35908 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT2P35908 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT2P35908 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
KRT2P35908 BX640514.1-201ENST00000583223 1918 ntBASIC17.1■□□□□ 0.33
KRT2P35908 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
KRT2P35908 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT2P35908 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT2P35908 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KRT2P35908 AGGF1P1-201ENST00000509500 2073 ntBASIC17.1■□□□□ 0.33
KRT2P35908 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT2P35908 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT2P35908 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT2P35908 RN7SKP175-201ENST00000408472 289 ntBASIC17.1■□□□□ 0.33
KRT2P35908 CD8B2-202ENST00000417670 633 ntBASIC17.1■□□□□ 0.33
KRT2P35908 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.1■□□□□ 0.33
KRT2P35908 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT2P35908 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT2P35908 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT2P35908 FAM8A4P-201ENST00000435433 1213 ntBASIC17.1■□□□□ 0.33
KRT2P35908 CROCCP4-201ENST00000457096 498 ntBASIC17.1■□□□□ 0.33
KRT2P35908 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.1■□□□□ 0.33
KRT2P35908 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.1■□□□□ 0.33
KRT2P35908 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.1■□□□□ 0.33
KRT2P35908 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms