Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.6□□□□□ -0.07
EPHA3P29320 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.6□□□□□ -0.07
EPHA3P29320 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
EPHA3P29320 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.6□□□□□ -0.07
EPHA3P29320 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.6□□□□□ -0.07
EPHA3P29320 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
EPHA3P29320 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.6□□□□□ -0.07
EPHA3P29320 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.6□□□□□ -0.07
EPHA3P29320 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 TUBB3P1-201ENST00000405796 1332 ntBASIC14.6□□□□□ -0.07
EPHA3P29320 AC093525.8-201ENST00000624099 1342 ntBASIC14.6□□□□□ -0.07
EPHA3P29320 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.6□□□□□ -0.07
EPHA3P29320 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
EPHA3P29320 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
EPHA3P29320 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EPHA3P29320 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.6□□□□□ -0.07
EPHA3P29320 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
EPHA3P29320 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
EPHA3P29320 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.59□□□□□ -0.07
EPHA3P29320 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
EPHA3P29320 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
EPHA3P29320 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
EPHA3P29320 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.59□□□□□ -0.07
EPHA3P29320 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
EPHA3P29320 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
EPHA3P29320 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.59□□□□□ -0.07
EPHA3P29320 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.59□□□□□ -0.07
EPHA3P29320 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.59□□□□□ -0.07
EPHA3P29320 AC112482.1-201ENST00000492080 688 ntBASIC14.59□□□□□ -0.07
EPHA3P29320 TIMM17BP1-201ENST00000545713 516 ntBASIC14.59□□□□□ -0.07
EPHA3P29320 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.59□□□□□ -0.07
EPHA3P29320 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.59□□□□□ -0.07
EPHA3P29320 AC010327.4-202ENST00000591484 748 ntBASIC14.59□□□□□ -0.07
EPHA3P29320 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.59□□□□□ -0.07
EPHA3P29320 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
EPHA3P29320 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.59□□□□□ -0.07
EPHA3P29320 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.59□□□□□ -0.07
EPHA3P29320 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.59□□□□□ -0.07
EPHA3P29320 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.59□□□□□ -0.07
EPHA3P29320 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.59□□□□□ -0.07
EPHA3P29320 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
EPHA3P29320 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
EPHA3P29320 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EPHA3P29320 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
EPHA3P29320 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
EPHA3P29320 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
EPHA3P29320 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
EPHA3P29320 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
EPHA3P29320 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
EPHA3P29320 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.58□□□□□ -0.08
EPHA3P29320 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.58□□□□□ -0.08
EPHA3P29320 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.58□□□□□ -0.08
EPHA3P29320 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.58□□□□□ -0.08
EPHA3P29320 AC027612.1-201ENST00000445234 2395 ntBASIC14.58□□□□□ -0.08
EPHA3P29320 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms