Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COL8A2P25067 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
COL8A2P25067 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
COL8A2P25067 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
COL8A2P25067 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
COL8A2P25067 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
COL8A2P25067 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.63□□□□□ -0.39
COL8A2P25067 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
COL8A2P25067 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
COL8A2P25067 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.63□□□□□ -0.39
COL8A2P25067 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
COL8A2P25067 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
COL8A2P25067 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.63□□□□□ -0.39
COL8A2P25067 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.63□□□□□ -0.39
COL8A2P25067 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
COL8A2P25067 HSPB1P2-201ENST00000448722 546 ntBASIC12.63□□□□□ -0.39
COL8A2P25067 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.63□□□□□ -0.39
COL8A2P25067 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.63□□□□□ -0.39
COL8A2P25067 AP001258.2-201ENST00000529891 490 ntBASIC12.63□□□□□ -0.39
COL8A2P25067 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
COL8A2P25067 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
COL8A2P25067 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.63□□□□□ -0.39
COL8A2P25067 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.63□□□□□ -0.39
COL8A2P25067 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.63□□□□□ -0.39
COL8A2P25067 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.63□□□□□ -0.39
COL8A2P25067 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
COL8A2P25067 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.63□□□□□ -0.39
COL8A2P25067 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL8A2P25067 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.63□□□□□ -0.39
COL8A2P25067 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
COL8A2P25067 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.62□□□□□ -0.39
COL8A2P25067 AP000593.2-201ENST00000542775 1433 ntBASIC12.62□□□□□ -0.39
COL8A2P25067 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.62□□□□□ -0.39
COL8A2P25067 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
COL8A2P25067 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.62□□□□□ -0.39
COL8A2P25067 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.62□□□□□ -0.39
COL8A2P25067 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
COL8A2P25067 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.62□□□□□ -0.39
COL8A2P25067 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 AL136309.1-201ENST00000403917 691 ntBASIC12.62□□□□□ -0.39
COL8A2P25067 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.62□□□□□ -0.39
COL8A2P25067 KRT8P13-201ENST00000463294 1010 ntBASIC12.62□□□□□ -0.39
COL8A2P25067 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.62□□□□□ -0.39
COL8A2P25067 AC103810.3-201ENST00000583567 96 ntBASIC12.62□□□□□ -0.39
COL8A2P25067 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.62□□□□□ -0.39
COL8A2P25067 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms