Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH1P12830 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDH1P12830 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 KRT8P35-201ENST00000483942 1338 ntBASIC14.63□□□□□ -0.07
CDH1P12830 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH1P12830 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH1P12830 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH1P12830 AC027601.5-201ENST00000624065 2482 ntBASIC14.63□□□□□ -0.07
CDH1P12830 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CDH1P12830 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH1P12830 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 BEND3P1-201ENST00000421591 1944 ntBASIC14.62□□□□□ -0.07
CDH1P12830 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH1P12830 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH1P12830 AC005252.3-201ENST00000623855 2258 ntBASIC14.62□□□□□ -0.07
CDH1P12830 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CDH1P12830 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH1P12830 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CDH1P12830 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CDH1P12830 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 ACTBP8-201ENST00000403258 1108 ntBASIC14.62□□□□□ -0.07
CDH1P12830 AL512384.1-201ENST00000406683 331 ntBASIC14.62□□□□□ -0.07
CDH1P12830 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH1P12830 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 BAATP1-201ENST00000412284 1225 ntBASIC14.62□□□□□ -0.07
CDH1P12830 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH1P12830 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH1P12830 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH1P12830 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.62□□□□□ -0.07
CDH1P12830 AC068587.3-201ENST00000526613 355 ntBASIC14.62□□□□□ -0.07
CDH1P12830 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH1P12830 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH1P12830 AC132938.2-201ENST00000579188 680 ntBASIC14.62□□□□□ -0.07
CDH1P12830 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.62□□□□□ -0.07
CDH1P12830 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.62□□□□□ -0.07
CDH1P12830 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH1P12830 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 AL591163.1-201ENST00000641757 987 ntBASIC14.62□□□□□ -0.07
CDH1P12830 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 MTHFR-210ENST00000641407 2387 ntBASIC14.62□□□□□ -0.07
CDH1P12830 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 LINC01230-201ENST00000625222 3017 ntBASIC14.62□□□□□ -0.07
CDH1P12830 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH1P12830 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 AC134312.5-201ENST00000568031 1313 ntBASIC14.62□□□□□ -0.07
CDH1P12830 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH1P12830 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH1P12830 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH1P12830 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH1P12830 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH1P12830 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CDH1P12830 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH1P12830 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH1P12830 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CDH1P12830 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms