Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.58■□□□□ 0.4
TOP1P11387 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.58■□□□□ 0.4
TOP1P11387 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.58■□□□□ 0.4
TOP1P11387 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
TOP1P11387 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TOP1P11387 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TOP1P11387 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.58■□□□□ 0.4
TOP1P11387 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TOP1P11387 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.57■□□□□ 0.4
TOP1P11387 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.57■□□□□ 0.4
TOP1P11387 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 FAM86MP-201ENST00000340703 885 ntBASIC17.57■□□□□ 0.4
TOP1P11387 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.57■□□□□ 0.4
TOP1P11387 Z93015.1-201ENST00000451718 390 ntBASIC17.57■□□□□ 0.4
TOP1P11387 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.57■□□□□ 0.4
TOP1P11387 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.57■□□□□ 0.4
TOP1P11387 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.57■□□□□ 0.4
TOP1P11387 EEF1DP1-201ENST00000585891 896 ntBASIC17.57■□□□□ 0.4
TOP1P11387 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.57■□□□□ 0.4
TOP1P11387 AC138696.2-201ENST00000607376 223 ntBASIC17.57■□□□□ 0.4
TOP1P11387 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.57■□□□□ 0.4
TOP1P11387 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.57■□□□□ 0.4
TOP1P11387 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.57■□□□□ 0.4
TOP1P11387 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.57■□□□□ 0.4
TOP1P11387 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.57■□□□□ 0.4
TOP1P11387 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TOP1P11387 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.57■□□□□ 0.4
TOP1P11387 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.57■□□□□ 0.4
TOP1P11387 AGAP7P-201ENST00000582299 2062 ntBASIC17.57■□□□□ 0.4
TOP1P11387 AGAP14-201ENST00000624701 2060 ntBASIC17.57■□□□□ 0.4
TOP1P11387 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.57■□□□□ 0.4
TOP1P11387 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOP1P11387 ACE3P-201ENST00000423435 1973 ntBASIC17.57■□□□□ 0.4
TOP1P11387 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.56■□□□□ 0.4
TOP1P11387 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.56■□□□□ 0.4
TOP1P11387 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TOP1P11387 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.56■□□□□ 0.4
TOP1P11387 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 BRWD1P1-201ENST00000401091 371 ntBASIC17.56■□□□□ 0.4
TOP1P11387 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.56■□□□□ 0.4
TOP1P11387 AC004945.1-201ENST00000416738 983 ntBASIC17.56■□□□□ 0.4
TOP1P11387 GOLGA2P4-201ENST00000441462 777 ntBASIC17.56■□□□□ 0.4
TOP1P11387 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.56■□□□□ 0.4
TOP1P11387 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.56■□□□□ 0.4
TOP1P11387 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TOP1P11387 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.56■□□□□ 0.4
TOP1P11387 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.56■□□□□ 0.4
TOP1P11387 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.56■□□□□ 0.4
TOP1P11387 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.56■□□□□ 0.4
TOP1P11387 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOP1P11387 KRT8P4-201ENST00000509735 1454 ntBASIC17.56■□□□□ 0.4
TOP1P11387 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TOP1P11387 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.56■□□□□ 0.4
TOP1P11387 AL023775.1-201ENST00000454907 1746 ntBASIC17.55■□□□□ 0.4
TOP1P11387 OR2I1P-209ENST00000641730 5365 ntBASIC17.55■□□□□ 0.4
TOP1P11387 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.55■□□□□ 0.4
TOP1P11387 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.55■□□□□ 0.4
TOP1P11387 AL138725.1-201ENST00000407347 1314 ntBASIC17.55■□□□□ 0.4
TOP1P11387 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TOP1P11387 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
TOP1P11387 RN7SKP230-201ENST00000365642 335 ntBASIC17.55■□□□□ 0.4
TOP1P11387 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.55■□□□□ 0.4
TOP1P11387 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TOP1P11387 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TOP1P11387 RN7SKP175-201ENST00000408472 289 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms