Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1AP08908 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.68□□□□□ -0.22
HTR1AP08908 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1AP08908 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1AP08908 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1AP08908 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1AP08908 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1AP08908 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1AP08908 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1AP08908 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1AP08908 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR1AP08908 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.68□□□□□ -0.22
HTR1AP08908 AGAP10P-201ENST00000454844 2418 ntBASIC13.68□□□□□ -0.22
HTR1AP08908 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
HTR1AP08908 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
HTR1AP08908 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.67□□□□□ -0.22
HTR1AP08908 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.67□□□□□ -0.22
HTR1AP08908 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.67□□□□□ -0.22
HTR1AP08908 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.67□□□□□ -0.22
HTR1AP08908 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.67□□□□□ -0.22
HTR1AP08908 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HTR1AP08908 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.67□□□□□ -0.22
HTR1AP08908 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.67□□□□□ -0.22
HTR1AP08908 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
HTR1AP08908 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
HTR1AP08908 YBX2P1-201ENST00000394192 760 ntBASIC13.67□□□□□ -0.22
HTR1AP08908 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HTR1AP08908 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.67□□□□□ -0.22
HTR1AP08908 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
HTR1AP08908 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.67□□□□□ -0.22
HTR1AP08908 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.67□□□□□ -0.22
HTR1AP08908 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.67□□□□□ -0.22
HTR1AP08908 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.67□□□□□ -0.22
HTR1AP08908 AC105021.1-202ENST00000570572 669 ntBASIC13.67□□□□□ -0.22
HTR1AP08908 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.67□□□□□ -0.22
HTR1AP08908 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.67□□□□□ -0.22
HTR1AP08908 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.67□□□□□ -0.22
HTR1AP08908 AC084121.4-201ENST00000641598 221 ntBASIC13.67□□□□□ -0.22
HTR1AP08908 AF228730.8-201ENST00000642140 221 ntBASIC13.67□□□□□ -0.22
HTR1AP08908 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.67□□□□□ -0.22
HTR1AP08908 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HTR1AP08908 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.67□□□□□ -0.22
HTR1AP08908 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
HTR1AP08908 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.67□□□□□ -0.22
HTR1AP08908 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
HTR1AP08908 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HTR1AP08908 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.66□□□□□ -0.22
HTR1AP08908 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.66□□□□□ -0.22
HTR1AP08908 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.66□□□□□ -0.22
HTR1AP08908 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HTR1AP08908 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HTR1AP08908 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HTR1AP08908 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HTR1AP08908 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HTR1AP08908 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HTR1AP08908 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HTR1AP08908 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HTR1AP08908 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HTR1AP08908 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
HTR1AP08908 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HTR1AP08908 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HTR1AP08908 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HTR1AP08908 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.66□□□□□ -0.22
HTR1AP08908 AL157414.3-201ENST00000624276 1954 ntBASIC13.66□□□□□ -0.22
HTR1AP08908 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HTR1AP08908 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HTR1AP08908 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.66□□□□□ -0.22
HTR1AP08908 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.66□□□□□ -0.22
HTR1AP08908 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HTR1AP08908 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HTR1AP08908 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.66□□□□□ -0.22
HTR1AP08908 AC069335.1-201ENST00000489972 472 ntBASIC13.66□□□□□ -0.22
HTR1AP08908 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.66□□□□□ -0.22
HTR1AP08908 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.66□□□□□ -0.22
HTR1AP08908 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.66□□□□□ -0.22
HTR1AP08908 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.66□□□□□ -0.22
HTR1AP08908 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HTR1AP08908 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.66□□□□□ -0.22
HTR1AP08908 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms