Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TCRAP04437 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TCRAP04437 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TCRAP04437 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TCRAP04437 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TCRAP04437 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
TCRAP04437 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
TCRAP04437 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.43□□□□□ -0.58
TCRAP04437 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.43□□□□□ -0.58
TCRAP04437 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TCRAP04437 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TCRAP04437 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
TCRAP04437 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 AC012617.1-204ENST00000586340 2305 ntBASIC11.42□□□□□ -0.58
TCRAP04437 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.42□□□□□ -0.58
TCRAP04437 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
TCRAP04437 AC015818.8-201ENST00000587907 1519 ntBASIC11.42□□□□□ -0.58
TCRAP04437 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
TCRAP04437 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
TCRAP04437 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TCRAP04437 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
TCRAP04437 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.42□□□□□ -0.58
TCRAP04437 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
TCRAP04437 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.42□□□□□ -0.58
TCRAP04437 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
TCRAP04437 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC11.42□□□□□ -0.58
TCRAP04437 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.42□□□□□ -0.58
TCRAP04437 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC11.42□□□□□ -0.58
TCRAP04437 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC11.42□□□□□ -0.58
TCRAP04437 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.42□□□□□ -0.58
TCRAP04437 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.42□□□□□ -0.58
TCRAP04437 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.42□□□□□ -0.58
TCRAP04437 KRT126P-201ENST00000549467 1181 ntBASIC11.42□□□□□ -0.58
TCRAP04437 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC11.42□□□□□ -0.58
TCRAP04437 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.42□□□□□ -0.58
TCRAP04437 MIR6080-201ENST00000617359 66 ntBASIC11.42□□□□□ -0.58
TCRAP04437 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.42□□□□□ -0.58
TCRAP04437 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TCRAP04437 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.42□□□□□ -0.58
TCRAP04437 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
TCRAP04437 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
TCRAP04437 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.42□□□□□ -0.58
TCRAP04437 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TCRAP04437 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.41□□□□□ -0.58
TCRAP04437 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.41□□□□□ -0.58
TCRAP04437 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
TCRAP04437 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TCRAP04437 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.41□□□□□ -0.58
TCRAP04437 ELL2P1-201ENST00000413990 1906 ntBASIC11.41□□□□□ -0.58
TCRAP04437 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.41□□□□□ -0.58
TCRAP04437 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.41□□□□□ -0.58
TCRAP04437 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TCRAP04437 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.41□□□□□ -0.58
TCRAP04437 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.41□□□□□ -0.58
TCRAP04437 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TCRAP04437 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.41□□□□□ -0.58
TCRAP04437 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
TCRAP04437 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms