Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC055876.3-201ENST00000431496 288 ntBASIC13.52□□□□□ -0.25
HLA-DQA2P01906 AL589987.1-201ENST00000453380 819 ntBASIC13.52□□□□□ -0.25
HLA-DQA2P01906 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 AC009407.1-201ENST00000568958 598 ntBASIC13.52□□□□□ -0.25
HLA-DQA2P01906 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 AC138649.4-201ENST00000612222 287 ntBASIC13.52□□□□□ -0.25
HLA-DQA2P01906 AC106028.4-201ENST00000614509 607 ntBASIC13.52□□□□□ -0.25
HLA-DQA2P01906 AC093512.1-201ENST00000617969 520 ntBASIC13.52□□□□□ -0.25
HLA-DQA2P01906 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 AC113367.3-201ENST00000508316 1912 ntBASIC13.51□□□□□ -0.25
HLA-DQA2P01906 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 FAM86LP-201ENST00000478302 853 ntBASIC13.51□□□□□ -0.25
HLA-DQA2P01906 SPDYE18-201ENST00000510091 1050 ntBASIC13.51□□□□□ -0.25
HLA-DQA2P01906 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 TPRX2P-201ENST00000535362 881 ntBASIC13.51□□□□□ -0.25
HLA-DQA2P01906 AC104794.3-201ENST00000566840 1248 ntBASIC13.51□□□□□ -0.25
HLA-DQA2P01906 AC008738.7-201ENST00000609744 511 ntBASIC13.51□□□□□ -0.25
HLA-DQA2P01906 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 AC139530.3-201ENST00000620344 690 ntBASIC13.51□□□□□ -0.25
HLA-DQA2P01906 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 AC097359.2-201ENST00000604992 2389 ntBASIC13.51□□□□□ -0.25
HLA-DQA2P01906 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
HLA-DQA2P01906 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DQA2P01906 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms