Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SOX1O00570 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
SOX1O00570 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SOX1O00570 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.59■□□□□ 0.09
SOX1O00570 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 RNVU1-8-201ENST00000364272 125 ntBASIC15.59■□□□□ 0.09
SOX1O00570 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC15.59■□□□□ 0.09
SOX1O00570 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SOX1O00570 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.59■□□□□ 0.09
SOX1O00570 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC15.59■□□□□ 0.09
SOX1O00570 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC15.59■□□□□ 0.09
SOX1O00570 HMGA1P2-201ENST00000430198 324 ntBASIC15.59■□□□□ 0.09
SOX1O00570 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC15.59■□□□□ 0.09
SOX1O00570 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.59■□□□□ 0.09
SOX1O00570 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.59■□□□□ 0.09
SOX1O00570 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.59■□□□□ 0.09
SOX1O00570 F11R-204ENST00000537746 1245 ntTSL 2 BASIC15.59■□□□□ 0.09
SOX1O00570 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.59■□□□□ 0.09
SOX1O00570 AC120498.7-201ENST00000562876 330 ntBASIC15.59■□□□□ 0.09
SOX1O00570 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SOX1O00570 DERL2-206ENST00000572834 589 ntTSL 3 BASIC15.59■□□□□ 0.09
SOX1O00570 NAT9-219ENST00000582524 573 ntTSL 4 BASIC15.59■□□□□ 0.09
SOX1O00570 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 AP006248.1-201ENST00000610471 67 ntBASIC15.59■□□□□ 0.09
SOX1O00570 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC15.59■□□□□ 0.09
SOX1O00570 AC015912.3-201ENST00000619432 348 ntBASIC15.59■□□□□ 0.09
SOX1O00570 AC079416.2-201ENST00000625035 1193 ntBASIC15.59■□□□□ 0.09
SOX1O00570 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC15.59■□□□□ 0.09
SOX1O00570 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.59■□□□□ 0.09
SOX1O00570 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.59■□□□□ 0.09
SOX1O00570 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.59■□□□□ 0.09
SOX1O00570 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
SOX1O00570 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SOX1O00570 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.59■□□□□ 0.09
SOX1O00570 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SOX1O00570 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SOX1O00570 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.59■□□□□ 0.09
SOX1O00570 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SOX1O00570 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SOX1O00570 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SOX1O00570 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SOX1O00570 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC15.58■□□□□ 0.09
SOX1O00570 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SOX1O00570 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC15.58■□□□□ 0.08
SOX1O00570 GOLGA6L16P-201ENST00000441780 1299 ntBASIC15.58■□□□□ 0.08
SOX1O00570 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.58■□□□□ 0.08
SOX1O00570 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.58■□□□□ 0.08
SOX1O00570 AL035414.1-201ENST00000451327 857 ntBASIC15.58■□□□□ 0.08
SOX1O00570 RN7SL277P-201ENST00000481521 288 ntBASIC15.58■□□□□ 0.08
SOX1O00570 RN7SL147P-201ENST00000487345 298 ntBASIC15.58■□□□□ 0.08
SOX1O00570 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.58■□□□□ 0.08
SOX1O00570 KRT18P37-201ENST00000520711 1282 ntBASIC15.58■□□□□ 0.08
SOX1O00570 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC15.58■□□□□ 0.08
SOX1O00570 RN7SL665P-201ENST00000578793 300 ntBASIC15.58■□□□□ 0.08
SOX1O00570 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC15.58■□□□□ 0.08
SOX1O00570 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC15.58■□□□□ 0.08
SOX1O00570 GGNBP1-204ENST00000613113 887 ntBASIC15.58■□□□□ 0.08
SOX1O00570 AL591424.3-201ENST00000614278 872 ntBASIC15.58■□□□□ 0.08
SOX1O00570 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
SOX1O00570 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 FKBP4P8-201ENST00000610931 1369 ntBASIC15.58■□□□□ 0.08
SOX1O00570 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.58■□□□□ 0.08
SOX1O00570 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SOX1O00570 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.58■□□□□ 0.08
SOX1O00570 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms