Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 GAPDHP40-201ENST00000505218 1006 ntBASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 AC022145.2-201ENST00000598203 171 ntBASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
DUXBA0A1W2PPF3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 AC023794.5-201ENST00000564380 2157 ntBASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 SPDYE7P-202ENST00000420373 878 ntBASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 SPDYE14P-201ENST00000442619 822 ntBASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 AC105339.1-204ENST00000636249 355 ntBASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 AL122018.1-201ENST00000446607 2310 ntBASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.23□□□□□ -0.45
DUXBA0A1W2PPF3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms