Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHGA11Q9Y5H2 BEND3P1-201ENST00000421591 1944 ntBASIC14.58□□□□□ -0.07
PCDHGA11Q9Y5H2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHGA11Q9Y5H2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
PCDHGA11Q9Y5H2 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
PCDHGA11Q9Y5H2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHGA11Q9Y5H2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHGA11Q9Y5H2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 PIN1P1-201ENST00000412108 996 ntBASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 AC002472.2-201ENST00000442739 958 ntBASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 API5-211ENST00000534695 560 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 DUX4L47-201ENST00000566374 394 ntBASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 AP005019.2-201ENST00000615104 511 ntBASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 AC010327.5-201ENST00000586923 3061 ntBASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 AC067750.1-201ENST00000608826 6545 ntBASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 AC018665.1-201ENST00000622927 1362 ntBASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
PCDHGA11Q9Y5H2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 ACKR1-201ENST00000368121 1240 ntBASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms