Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 AC018665.1-201ENST00000622927 1362 ntBASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 NUS1P3-201ENST00000423502 862 ntBASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 DFFBP1-201ENST00000433250 979 ntBASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 TSPY16P-201ENST00000449843 468 ntBASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 AC092552.1-201ENST00000547243 906 ntBASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 AC124283.3-201ENST00000570869 594 ntBASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 CHCHD2P3-201ENST00000603038 451 ntBASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 AC027612.1-201ENST00000445234 2395 ntBASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 KRT8P22-201ENST00000562317 1415 ntBASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 AC007541.1-201ENST00000570282 1469 ntBASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 AL139094.1-201ENST00000405549 1188 ntBASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 AL442647.2-201ENST00000429864 857 ntBASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 AL132655.2-201ENST00000596276 594 ntBASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 AJ011932.1-201ENST00000621707 465 ntBASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 AC008761.3-201ENST00000624803 892 ntBASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
RNF11Q9Y3C5 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF11Q9Y3C5 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF11Q9Y3C5 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms