Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 KRT8P4-201ENST00000509735 1454 ntBASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 CHMP1AP1-201ENST00000445563 662 ntBASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 AL451050.2-201ENST00000606967 682 ntBASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 AC018735.1-201ENST00000437208 1502 ntBASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSX2IPQ9Y2D8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 MIR769-201ENST00000390225 118 ntBASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 AL354877.1-201ENST00000424412 413 ntBASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 AP001002.3-201ENST00000623482 206 ntBASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSX2IPQ9Y2D8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms