Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 MIR6746-201ENST00000620971 63 ntBASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 AC144831.1-201ENST00000573312 2656 ntBASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 MIR2392-201ENST00000584881 84 ntBASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 AL627230.2-201ENST00000613254 655 ntBASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 PTPN20CP-201ENST00000614090 920 ntBASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 AC002044.2-201ENST00000624910 970 ntBASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ZC3H4Q9UPT8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 RN7SL494P-201ENST00000461517 304 ntBASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 RN7SL23P-201ENST00000484055 275 ntBASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 AL136379.1-201ENST00000623471 2642 ntBASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms