Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 AC005632.3-201ENST00000605544 308 ntBASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 AC020658.6-201ENST00000623564 1870 ntBASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.26■□□□□ 0.19
TRMT13Q9NUP7 C18orf15-201ENST00000623680 2534 ntBASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 TMBIM7P-202ENST00000641474 1516 ntBASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 AP000358.1-201ENST00000456260 156 ntBASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 DNM1P30-201ENST00000563586 452 ntBASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TRMT13Q9NUP7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 AC112693.3-201ENST00000624819 1983 ntBASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRMT13Q9NUP7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms