Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 Z97205.2-201ENST00000564697 1639 ntBASIC13.17□□□□□ -0.3
ELL3Q9HB65 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.17□□□□□ -0.3
ELL3Q9HB65 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 AL805961.2-201ENST00000642139 4817 ntBASIC13.17□□□□□ -0.3
ELL3Q9HB65 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 TSSK5P-201ENST00000423978 907 ntBASIC13.17□□□□□ -0.3
ELL3Q9HB65 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 KRT18P43-201ENST00000469825 1281 ntBASIC13.17□□□□□ -0.3
ELL3Q9HB65 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.17□□□□□ -0.3
ELL3Q9HB65 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ELL3Q9HB65 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ELL3Q9HB65 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 AC018529.2-202ENST00000611482 3087 ntBASIC13.16□□□□□ -0.3
ELL3Q9HB65 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 MTHFR-210ENST00000641407 2387 ntBASIC13.16□□□□□ -0.3
ELL3Q9HB65 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 MEX3B-202ENST00000558133 4333 ntBASIC13.16□□□□□ -0.3
ELL3Q9HB65 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 REXO1L4P-201ENST00000605109 1937 ntBASIC13.16□□□□□ -0.3
ELL3Q9HB65 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 MIR770-201ENST00000390219 98 ntBASIC13.16□□□□□ -0.3
ELL3Q9HB65 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 BASP1P1-201ENST00000430708 665 ntBASIC13.16□□□□□ -0.3
ELL3Q9HB65 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 AL512638.1-201ENST00000457493 794 ntBASIC13.16□□□□□ -0.3
ELL3Q9HB65 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 LINC01115-203ENST00000606068 577 ntBASIC13.16□□□□□ -0.3
ELL3Q9HB65 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 AL121723.1-201ENST00000445194 1519 ntBASIC13.16□□□□□ -0.3
ELL3Q9HB65 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms