Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 AC107464.3-201ENST00000609172 737 ntBASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 AC073911.3-201ENST00000624401 631 ntBASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 AC090502.4-201ENST00000551714 1386 ntBASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 AC009093.10-201ENST00000641956 1442 ntBASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 HLA-DMA-203ENST00000395305 777 ntBASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 AL157792.1-201ENST00000488281 530 ntBASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 AC005357.2-202ENST00000590507 1060 ntBASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 MRPL37P1-201ENST00000592451 1337 ntBASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 MARK2P16-201ENST00000605714 1723 ntBASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.86■□□□□ 0.45
RTFDC1Q9BY42 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 ALG1L6P-201ENST00000515248 758 ntBASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 NUDT4P2-201ENST00000578341 546 ntBASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 AC005041.3-201ENST00000606287 649 ntBASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 LINC01815-202ENST00000641468 1409 ntBASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RTFDC1Q9BY42 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms