Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 SSR4P1-203ENST00000599569 2260 ntBASIC16.79■□□□□ 0.28
PTPN18Q99952 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN18Q99952 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PTPN18Q99952 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.79■□□□□ 0.28
PTPN18Q99952 OR8T1P-201ENST00000421347 918 ntBASIC16.79■□□□□ 0.28
PTPN18Q99952 AC018638.5-201ENST00000450885 754 ntBASIC16.79■□□□□ 0.28
PTPN18Q99952 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN18Q99952 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN18Q99952 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN18Q99952 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.79■□□□□ 0.28
PTPN18Q99952 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.79■□□□□ 0.28
PTPN18Q99952 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
PTPN18Q99952 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.79■□□□□ 0.28
PTPN18Q99952 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PTPN18Q99952 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN18Q99952 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.79■□□□□ 0.28
PTPN18Q99952 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 AC009093.10-201ENST00000641956 1442 ntBASIC16.79■□□□□ 0.28
PTPN18Q99952 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN18Q99952 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN18Q99952 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
PTPN18Q99952 MRPL37P1-201ENST00000592451 1337 ntBASIC16.78■□□□□ 0.28
PTPN18Q99952 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN18Q99952 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN18Q99952 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN18Q99952 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN18Q99952 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.78■□□□□ 0.28
PTPN18Q99952 OR5BD1P-201ENST00000532527 817 ntBASIC16.78■□□□□ 0.28
PTPN18Q99952 AC226150.1-201ENST00000544259 466 ntBASIC16.78■□□□□ 0.28
PTPN18Q99952 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN18Q99952 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.78■□□□□ 0.28
PTPN18Q99952 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.78■□□□□ 0.28
PTPN18Q99952 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PTPN18Q99952 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PTPN18Q99952 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN18Q99952 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PTPN18Q99952 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN18Q99952 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN18Q99952 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN18Q99952 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PTPN18Q99952 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN18Q99952 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN18Q99952 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN18Q99952 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN18Q99952 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.77■□□□□ 0.28
PTPN18Q99952 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
PTPN18Q99952 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN18Q99952 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PTPN18Q99952 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.77■□□□□ 0.28
PTPN18Q99952 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.77■□□□□ 0.28
PTPN18Q99952 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN18Q99952 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN18Q99952 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN18Q99952 MIR566-201ENST00000385187 94 ntBASIC16.77■□□□□ 0.28
PTPN18Q99952 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PTPN18Q99952 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PTPN18Q99952 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN18Q99952 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN18Q99952 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.77■□□□□ 0.28
PTPN18Q99952 AC108734.2-201ENST00000420887 1069 ntBASIC16.77■□□□□ 0.28
PTPN18Q99952 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN18Q99952 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.77■□□□□ 0.28
PTPN18Q99952 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PTPN18Q99952 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN18Q99952 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN18Q99952 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.77■□□□□ 0.28
PTPN18Q99952 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN18Q99952 AC027139.1-201ENST00000565286 951 ntBASIC16.77■□□□□ 0.28
PTPN18Q99952 PEBP1P2-201ENST00000603980 558 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms