Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NLRP3Q96P20 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NLRP3Q96P20 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NLRP3Q96P20 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NLRP3Q96P20 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 RPSAP31-201ENST00000416648 895 ntBASIC18.3■□□□□ 0.52
NLRP3Q96P20 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NLRP3Q96P20 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NLRP3Q96P20 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 PHBP15-201ENST00000574228 665 ntBASIC18.3■□□□□ 0.52
NLRP3Q96P20 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NLRP3Q96P20 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NLRP3Q96P20 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NLRP3Q96P20 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NLRP3Q96P20 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NLRP3Q96P20 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NLRP3Q96P20 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NLRP3Q96P20 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 AC018629.1-201ENST00000623381 1736 ntBASIC18.29■□□□□ 0.52
NLRP3Q96P20 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 CICP6-201ENST00000457191 2729 ntBASIC18.29■□□□□ 0.52
NLRP3Q96P20 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.29■□□□□ 0.52
NLRP3Q96P20 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 AC046158.3-201ENST00000624947 2558 ntBASIC18.29■□□□□ 0.52
NLRP3Q96P20 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NLRP3Q96P20 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 MRPL37P1-201ENST00000592451 1337 ntBASIC18.28■□□□□ 0.52
NLRP3Q96P20 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 AP000356.3-201ENST00000382243 753 ntBASIC18.28■□□□□ 0.52
NLRP3Q96P20 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 RPS9P1-201ENST00000419943 583 ntBASIC18.28■□□□□ 0.52
NLRP3Q96P20 TSPY25P-201ENST00000429463 745 ntBASIC18.28■□□□□ 0.52
NLRP3Q96P20 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 AC138894.2-201ENST00000602838 371 ntBASIC18.28■□□□□ 0.52
NLRP3Q96P20 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms