Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 AC005252.3-201ENST00000623855 2258 ntBASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 AC241585.1-201ENST00000433527 519 ntBASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 AC067863.1-201ENST00000494933 530 ntBASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 AC004449.1-201ENST00000564240 433 ntBASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 BX539320.1-201ENST00000623759 877 ntBASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 AC011840.2-201ENST00000563063 1520 ntBASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC44A1Q8WWI5 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 AC067750.1-201ENST00000608826 6545 ntBASIC15□□□□□ -0.01
SLC44A1Q8WWI5 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 RN7SL399P-201ENST00000471648 279 ntBASIC15□□□□□ -0.01
SLC44A1Q8WWI5 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 AC004840.1-201ENST00000636359 365 ntBASIC15□□□□□ -0.01
SLC44A1Q8WWI5 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms