Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 SNORA57-201ENST00000383870 149 ntBASIC20.48■□□□□ 0.87
UBR1Q8IWV7 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 AC092570.1-201ENST00000414446 469 ntBASIC20.48■□□□□ 0.87
UBR1Q8IWV7 AC073210.1-201ENST00000414799 232 ntBASIC20.48■□□□□ 0.87
UBR1Q8IWV7 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 AL136982.5-201ENST00000605222 294 ntBASIC20.48■□□□□ 0.87
UBR1Q8IWV7 COQ4-204ENST00000608951 781 ntTSL 2 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 CCT8L1P-201ENST00000465400 1674 ntBASIC20.48■□□□□ 0.87
UBR1Q8IWV7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 PDXDC2P-206ENST00000534700 1315 ntBASIC20.48■□□□□ 0.87
UBR1Q8IWV7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBR1Q8IWV7 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 AC138761.6-201ENST00000583997 1423 ntBASIC20.47■□□□□ 0.87
UBR1Q8IWV7 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 GOLGA6L16P-201ENST00000441780 1299 ntBASIC20.47■□□□□ 0.87
UBR1Q8IWV7 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC20.47■□□□□ 0.87
UBR1Q8IWV7 AC020904.3-201ENST00000624199 442 ntBASIC20.47■□□□□ 0.87
UBR1Q8IWV7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 SEPHS2P1-201ENST00000511618 1162 ntBASIC20.46■□□□□ 0.87
UBR1Q8IWV7 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
UBR1Q8IWV7 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms