Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 AC084364.1-201ENST00000551967 1556 ntBASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 AC111170.3-201ENST00000624282 2464 ntBASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 MKRN5P-201ENST00000445263 1467 ntBASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 AC108073.2-201ENST00000464002 357 ntBASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 AL121772.3-201ENST00000610840 674 ntBASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CROCCP3Q8IVE0 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 EEF1DP4-201ENST00000446006 880 ntBASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 RN7SL850P-201ENST00000579959 291 ntBASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 AC092119.3-201ENST00000612618 583 ntBASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.6□□□□□ -0.23
CROCCP3Q8IVE0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms