Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 AP005264.6-204ENST00000588436 719 ntBASIC12.09□□□□□ -0.47
VPS13CQ709C8 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 AC138035.3-201ENST00000622706 2791 ntBASIC12.09□□□□□ -0.47
VPS13CQ709C8 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.09□□□□□ -0.47
VPS13CQ709C8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13CQ709C8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
VPS13CQ709C8 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC12.08□□□□□ -0.47
VPS13CQ709C8 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
VPS13CQ709C8 BCAS2P2-201ENST00000425064 674 ntBASIC12.08□□□□□ -0.47
VPS13CQ709C8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.08□□□□□ -0.47
VPS13CQ709C8 AC092862.1-201ENST00000541534 533 ntBASIC12.08□□□□□ -0.47
VPS13CQ709C8 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.08□□□□□ -0.47
VPS13CQ709C8 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
VPS13CQ709C8 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.08□□□□□ -0.47
VPS13CQ709C8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
VPS13CQ709C8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.08□□□□□ -0.47
VPS13CQ709C8 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 AC108734.2-201ENST00000420887 1069 ntBASIC12.08□□□□□ -0.48
VPS13CQ709C8 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 SRP14-204ENST00000558720 780 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 AC013268.4-201ENST00000637413 2228 ntBASIC12.08□□□□□ -0.48
VPS13CQ709C8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13CQ709C8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13CQ709C8 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.08□□□□□ -0.48
VPS13CQ709C8 CICP6-201ENST00000457191 2729 ntBASIC12.08□□□□□ -0.48
VPS13CQ709C8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
VPS13CQ709C8 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VPS13CQ709C8 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VPS13CQ709C8 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms