Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
CMC4P56277 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
CMC4P56277 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
CMC4P56277 MIR658-201ENST00000385210 100 ntBASIC11.14□□□□□ -0.63
CMC4P56277 AC079776.1-201ENST00000401540 1152 ntBASIC11.14□□□□□ -0.63
CMC4P56277 MIR1909-201ENST00000411312 80 ntBASIC11.14□□□□□ -0.63
CMC4P56277 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.14□□□□□ -0.63
CMC4P56277 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.14□□□□□ -0.63
CMC4P56277 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CMC4P56277 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC11.14□□□□□ -0.63
CMC4P56277 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC11.14□□□□□ -0.63
CMC4P56277 DUX4L45-201ENST00000566406 1057 ntBASIC11.14□□□□□ -0.63
CMC4P56277 OR10B1P-201ENST00000601666 907 ntBASIC11.14□□□□□ -0.63
CMC4P56277 ECM1P1-201ENST00000604092 1279 ntBASIC11.14□□□□□ -0.63
CMC4P56277 AC138696.2-201ENST00000607376 223 ntBASIC11.14□□□□□ -0.63
CMC4P56277 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.14□□□□□ -0.63
CMC4P56277 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.14□□□□□ -0.63
CMC4P56277 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.14□□□□□ -0.63
CMC4P56277 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CMC4P56277 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.14□□□□□ -0.63
CMC4P56277 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CMC4P56277 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
CMC4P56277 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC11.14□□□□□ -0.63
CMC4P56277 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.14□□□□□ -0.63
CMC4P56277 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.14□□□□□ -0.63
CMC4P56277 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.13□□□□□ -0.63
CMC4P56277 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC11.13□□□□□ -0.63
CMC4P56277 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.13□□□□□ -0.63
CMC4P56277 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
CMC4P56277 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.13□□□□□ -0.63
CMC4P56277 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 TCAF2P1-201ENST00000291129 2421 ntBASIC11.13□□□□□ -0.63
CMC4P56277 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CMC4P56277 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 AC004945.1-201ENST00000416738 983 ntBASIC11.13□□□□□ -0.63
CMC4P56277 AC079178.1-201ENST00000420915 656 ntBASIC11.13□□□□□ -0.63
CMC4P56277 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC11.13□□□□□ -0.63
CMC4P56277 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 FAM58BP-201ENST00000439056 645 ntBASIC11.13□□□□□ -0.63
CMC4P56277 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.13□□□□□ -0.63
CMC4P56277 CSF2RBP1-201ENST00000447905 391 ntBASIC11.13□□□□□ -0.63
CMC4P56277 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 CROCCP4-201ENST00000457096 498 ntBASIC11.13□□□□□ -0.63
CMC4P56277 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.13□□□□□ -0.63
CMC4P56277 AC106820.3-201ENST00000561653 397 ntBASIC11.13□□□□□ -0.63
CMC4P56277 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC11.13□□□□□ -0.63
CMC4P56277 AC010328.2-201ENST00000597698 1111 ntBASIC11.13□□□□□ -0.63
CMC4P56277 AC244157.2-201ENST00000616239 1006 ntBASIC11.13□□□□□ -0.63
CMC4P56277 MIR6752-201ENST00000618442 71 ntBASIC11.13□□□□□ -0.63
CMC4P56277 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.13□□□□□ -0.63
CMC4P56277 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms