Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH4P55283 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CDH4P55283 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH4P55283 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH4P55283 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH4P55283 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH4P55283 PUDPP3-201ENST00000445368 636 ntBASIC15.25■□□□□ 0.03
CDH4P55283 PFN1P12-201ENST00000455938 534 ntBASIC15.25■□□□□ 0.03
CDH4P55283 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH4P55283 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.25■□□□□ 0.03
CDH4P55283 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH4P55283 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH4P55283 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH4P55283 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH4P55283 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH4P55283 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDH4P55283 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH4P55283 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 SHC1P1-201ENST00000425230 1745 ntBASIC15.25■□□□□ 0.03
CDH4P55283 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH4P55283 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
CDH4P55283 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH4P55283 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH4P55283 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDH4P55283 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
CDH4P55283 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH4P55283 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH4P55283 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDH4P55283 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH4P55283 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
CDH4P55283 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH4P55283 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDH4P55283 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CDH4P55283 FAM86MP-201ENST00000340703 885 ntBASIC15.24■□□□□ 0.03
CDH4P55283 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH4P55283 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH4P55283 AL591846.1-201ENST00000451736 433 ntBASIC15.24■□□□□ 0.03
CDH4P55283 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH4P55283 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDH4P55283 RN7SL219P-201ENST00000582872 296 ntBASIC15.24■□□□□ 0.03
CDH4P55283 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH4P55283 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH4P55283 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDH4P55283 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH4P55283 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH4P55283 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH4P55283 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDH4P55283 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.23■□□□□ 0.03
CDH4P55283 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CDH4P55283 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CDH4P55283 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH4P55283 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH4P55283 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH4P55283 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDH4P55283 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 MIR663B-201ENST00000408361 115 ntBASIC15.23■□□□□ 0.03
CDH4P55283 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH4P55283 AL354877.1-201ENST00000424412 413 ntBASIC15.23■□□□□ 0.03
CDH4P55283 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH4P55283 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH4P55283 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms