Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC14.74□□□□□ -0.05
GTF2A1P52655 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GTF2A1P52655 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
GTF2A1P52655 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 TOP3BP1-201ENST00000420768 1380 ntBASIC14.73□□□□□ -0.05
GTF2A1P52655 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GTF2A1P52655 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GTF2A1P52655 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
GTF2A1P52655 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.73□□□□□ -0.05
GTF2A1P52655 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.73□□□□□ -0.05
GTF2A1P52655 AC211429.1-201ENST00000415277 523 ntBASIC14.73□□□□□ -0.05
GTF2A1P52655 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.73□□□□□ -0.05
GTF2A1P52655 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.73□□□□□ -0.05
GTF2A1P52655 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
GTF2A1P52655 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.73□□□□□ -0.05
GTF2A1P52655 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.73□□□□□ -0.05
GTF2A1P52655 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 AL353135.1-201ENST00000606729 504 ntBASIC14.73□□□□□ -0.05
GTF2A1P52655 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
GTF2A1P52655 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.73□□□□□ -0.05
GTF2A1P52655 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
GTF2A1P52655 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC14.73□□□□□ -0.05
GTF2A1P52655 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
GTF2A1P52655 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 AL645937.6-201ENST00000641122 3727 ntBASIC14.73□□□□□ -0.05
GTF2A1P52655 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GTF2A1P52655 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GTF2A1P52655 KRT8P39-201ENST00000396270 1433 ntBASIC14.73□□□□□ -0.05
GTF2A1P52655 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1P52655 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
GTF2A1P52655 C2-209ENST00000452323 1999 ntTSL 2 BASIC14.73□□□□□ -0.05
GTF2A1P52655 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GTF2A1P52655 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1P52655 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
GTF2A1P52655 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1P52655 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
GTF2A1P52655 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
GTF2A1P52655 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
GTF2A1P52655 IGHV3-47-201ENST00000425060 335 ntBASIC14.72□□□□□ -0.05
GTF2A1P52655 TOB2P1-201ENST00000469761 992 ntBASIC14.72□□□□□ -0.05
GTF2A1P52655 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.72□□□□□ -0.05
GTF2A1P52655 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1P52655 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.72□□□□□ -0.05
GTF2A1P52655 TPSP2-201ENST00000561760 610 ntBASIC14.72□□□□□ -0.05
GTF2A1P52655 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1P52655 AC114341.1-201ENST00000618070 349 ntBASIC14.72□□□□□ -0.05
GTF2A1P52655 AC073592.4-201ENST00000623827 446 ntBASIC14.72□□□□□ -0.05
GTF2A1P52655 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.72□□□□□ -0.05
GTF2A1P52655 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1P52655 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1P52655 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1P52655 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1P52655 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
GTF2A1P52655 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1P52655 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.72□□□□□ -0.05
GTF2A1P52655 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
GTF2A1P52655 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1P52655 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1P52655 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms