Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RRP7BP-205ENST00000566851 833 ntBASIC14.01□□□□□ -0.17
RNF144AP50876 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.01□□□□□ -0.17
RNF144AP50876 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.01□□□□□ -0.17
RNF144AP50876 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.01□□□□□ -0.17
RNF144AP50876 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RNF144AP50876 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.01□□□□□ -0.17
RNF144AP50876 AC092364.2-202ENST00000597012 1073 ntBASIC14.01□□□□□ -0.17
RNF144AP50876 AC099568.2-201ENST00000609194 695 ntBASIC14.01□□□□□ -0.17
RNF144AP50876 AC005252.2-201ENST00000624630 1141 ntBASIC14.01□□□□□ -0.17
RNF144AP50876 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.01□□□□□ -0.17
RNF144AP50876 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.01□□□□□ -0.17
RNF144AP50876 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RNF144AP50876 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.01□□□□□ -0.17
RNF144AP50876 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF144AP50876 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14□□□□□ -0.17
RNF144AP50876 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14□□□□□ -0.17
RNF144AP50876 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14□□□□□ -0.17
RNF144AP50876 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 KRT8P22-201ENST00000562317 1415 ntBASIC14□□□□□ -0.17
RNF144AP50876 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RNF144AP50876 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14□□□□□ -0.17
RNF144AP50876 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
RNF144AP50876 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14□□□□□ -0.17
RNF144AP50876 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14□□□□□ -0.17
RNF144AP50876 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 AC087499.6-201ENST00000411576 835 ntBASIC14□□□□□ -0.17
RNF144AP50876 SOCS2P1-201ENST00000417727 557 ntBASIC14□□□□□ -0.17
RNF144AP50876 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14□□□□□ -0.17
RNF144AP50876 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC14□□□□□ -0.17
RNF144AP50876 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14□□□□□ -0.17
RNF144AP50876 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14□□□□□ -0.17
RNF144AP50876 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14□□□□□ -0.17
RNF144AP50876 AC138761.1-201ENST00000584393 385 ntBASIC14□□□□□ -0.17
RNF144AP50876 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14□□□□□ -0.17
RNF144AP50876 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14□□□□□ -0.17
RNF144AP50876 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14□□□□□ -0.17
RNF144AP50876 BX539320.1-201ENST00000623759 877 ntBASIC14□□□□□ -0.17
RNF144AP50876 CU634019.7-201ENST00000624153 1185 ntBASIC14□□□□□ -0.17
RNF144AP50876 FP236241.2-201ENST00000624906 1185 ntBASIC14□□□□□ -0.17
RNF144AP50876 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14□□□□□ -0.17
RNF144AP50876 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14□□□□□ -0.17
RNF144AP50876 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RNF144AP50876 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNF144AP50876 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14□□□□□ -0.17
RNF144AP50876 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14□□□□□ -0.17
RNF144AP50876 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RNF144AP50876 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14□□□□□ -0.17
RNF144AP50876 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14□□□□□ -0.17
RNF144AP50876 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.99□□□□□ -0.17
RNF144AP50876 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.99□□□□□ -0.17
RNF144AP50876 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.99□□□□□ -0.17
RNF144AP50876 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.99□□□□□ -0.17
RNF144AP50876 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RNF144AP50876 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.99□□□□□ -0.17
RNF144AP50876 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.99□□□□□ -0.17
RNF144AP50876 RPL13AP25-201ENST00000484130 612 ntBASIC13.99□□□□□ -0.17
RNF144AP50876 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RNF144AP50876 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
RNF144AP50876 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.99□□□□□ -0.17
RNF144AP50876 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms