Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC013726.1-201ENST00000563747 2285 ntBASIC16.42■□□□□ 0.22
CPT1AP50416 SSR4P1-203ENST00000599569 2260 ntBASIC16.42■□□□□ 0.22
CPT1AP50416 AC008894.3-201ENST00000624324 3103 ntBASIC16.41■□□□□ 0.22
CPT1AP50416 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CPT1AP50416 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CPT1AP50416 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CPT1AP50416 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.41■□□□□ 0.22
CPT1AP50416 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.41■□□□□ 0.22
CPT1AP50416 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.41■□□□□ 0.22
CPT1AP50416 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.41■□□□□ 0.22
CPT1AP50416 AL031713.1-201ENST00000564813 661 ntBASIC16.41■□□□□ 0.22
CPT1AP50416 MIR3677-201ENST00000578964 60 ntBASIC16.41■□□□□ 0.22
CPT1AP50416 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.41■□□□□ 0.22
CPT1AP50416 AC007718.1-201ENST00000621078 280 ntBASIC16.41■□□□□ 0.22
CPT1AP50416 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.41■□□□□ 0.22
CPT1AP50416 AC092299.1-201ENST00000632679 757 ntBASIC16.41■□□□□ 0.22
CPT1AP50416 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.41■□□□□ 0.22
CPT1AP50416 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.41■□□□□ 0.22
CPT1AP50416 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPT1AP50416 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 TMBIM7P-202ENST00000641474 1516 ntBASIC16.4■□□□□ 0.22
CPT1AP50416 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CPT1AP50416 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CPT1AP50416 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.4■□□□□ 0.22
CPT1AP50416 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CPT1AP50416 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.4■□□□□ 0.22
CPT1AP50416 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.4■□□□□ 0.22
CPT1AP50416 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.4■□□□□ 0.22
CPT1AP50416 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.4■□□□□ 0.22
CPT1AP50416 TSPY25P-201ENST00000429463 745 ntBASIC16.4■□□□□ 0.22
CPT1AP50416 AC078991.1-201ENST00000437297 610 ntBASIC16.4■□□□□ 0.22
CPT1AP50416 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.4■□□□□ 0.22
CPT1AP50416 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 NPM1P43-201ENST00000558669 786 ntBASIC16.4■□□□□ 0.22
CPT1AP50416 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.4■□□□□ 0.22
CPT1AP50416 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CPT1AP50416 PHBP15-201ENST00000574228 665 ntBASIC16.4■□□□□ 0.22
CPT1AP50416 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.4■□□□□ 0.22
CPT1AP50416 MIR4750-201ENST00000584564 56 ntBASIC16.4■□□□□ 0.22
CPT1AP50416 RN7SL736P-201ENST00000613111 269 ntBASIC16.4■□□□□ 0.22
CPT1AP50416 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CPT1AP50416 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CPT1AP50416 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.4■□□□□ 0.22
CPT1AP50416 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 AC015909.3-201ENST00000572855 1794 ntBASIC16.4■□□□□ 0.22
CPT1AP50416 LINC01165-201ENST00000445190 1623 ntBASIC16.4■□□□□ 0.22
CPT1AP50416 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.4■□□□□ 0.22
CPT1AP50416 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.4■□□□□ 0.22
CPT1AP50416 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.4■□□□□ 0.22
CPT1AP50416 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPT1AP50416 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CPT1AP50416 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.39■□□□□ 0.22
CPT1AP50416 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CPT1AP50416 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.39■□□□□ 0.21
CPT1AP50416 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CPT1AP50416 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.39■□□□□ 0.21
CPT1AP50416 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms