Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.91□□□□□ -0.5
CDC34P49427 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CDC34P49427 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.9□□□□□ -0.5
CDC34P49427 AC092053.3-201ENST00000641308 4975 ntBASIC11.9□□□□□ -0.5
CDC34P49427 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 AC090114.2-201ENST00000608477 7054 ntBASIC11.9□□□□□ -0.5
CDC34P49427 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
CDC34P49427 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.9□□□□□ -0.5
CDC34P49427 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 AGGF1P1-201ENST00000509500 2073 ntBASIC11.9□□□□□ -0.5
CDC34P49427 AL356585.2-201ENST00000625078 2396 ntBASIC11.9□□□□□ -0.5
CDC34P49427 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.9□□□□□ -0.5
CDC34P49427 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CDC34P49427 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CDC34P49427 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.9□□□□□ -0.5
CDC34P49427 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
CDC34P49427 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
CDC34P49427 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 TFAMP1-201ENST00000412727 736 ntBASIC11.9□□□□□ -0.5
CDC34P49427 UPK3BP1-201ENST00000428678 509 ntBASIC11.9□□□□□ -0.5
CDC34P49427 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CDC34P49427 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC11.9□□□□□ -0.5
CDC34P49427 TARDBPP1-201ENST00000442013 1203 ntBASIC11.9□□□□□ -0.5
CDC34P49427 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.9□□□□□ -0.5
CDC34P49427 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.9□□□□□ -0.5
CDC34P49427 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 SLED1-202ENST00000512051 380 ntBASIC11.9□□□□□ -0.5
CDC34P49427 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.9□□□□□ -0.5
CDC34P49427 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CDC34P49427 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.9□□□□□ -0.5
CDC34P49427 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.9□□□□□ -0.5
CDC34P49427 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.9□□□□□ -0.5
CDC34P49427 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.9□□□□□ -0.5
CDC34P49427 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.9□□□□□ -0.5
CDC34P49427 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CDC34P49427 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC34P49427 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CDC34P49427 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
CDC34P49427 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CDC34P49427 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CDC34P49427 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
CDC34P49427 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.89□□□□□ -0.51
CDC34P49427 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.89□□□□□ -0.51
CDC34P49427 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.89□□□□□ -0.51
CDC34P49427 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CDC34P49427 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
CDC34P49427 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CDC34P49427 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC11.89□□□□□ -0.51
CDC34P49427 RN7SL589P-201ENST00000481268 310 ntBASIC11.89□□□□□ -0.51
CDC34P49427 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CDC34P49427 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC11.89□□□□□ -0.51
CDC34P49427 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC11.89□□□□□ -0.51
CDC34P49427 PDPK2P-202ENST00000562415 1191 ntBASIC11.89□□□□□ -0.51
CDC34P49427 AP000842.3-202ENST00000569238 1080 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms