Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.83■□□□□ 0.12
BRCC3P46736 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.83■□□□□ 0.12
BRCC3P46736 VDAC1P1-201ENST00000439229 848 ntBASIC15.83■□□□□ 0.12
BRCC3P46736 PUDPP3-201ENST00000445368 636 ntBASIC15.83■□□□□ 0.12
BRCC3P46736 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRCC3P46736 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.83■□□□□ 0.12
BRCC3P46736 RN7SL11P-201ENST00000471305 293 ntBASIC15.83■□□□□ 0.12
BRCC3P46736 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.83■□□□□ 0.12
BRCC3P46736 RHOQP1-201ENST00000555758 579 ntBASIC15.83■□□□□ 0.12
BRCC3P46736 AL160314.3-201ENST00000556041 767 ntBASIC15.83■□□□□ 0.12
BRCC3P46736 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.83■□□□□ 0.12
BRCC3P46736 AC008805.1-201ENST00000590892 364 ntBASIC15.83■□□□□ 0.12
BRCC3P46736 AC091544.8-201ENST00000619490 361 ntBASIC15.83■□□□□ 0.12
BRCC3P46736 AC027601.3-201ENST00000622907 509 ntBASIC15.83■□□□□ 0.12
BRCC3P46736 Z98259.2-201ENST00000641583 609 ntBASIC15.83■□□□□ 0.12
BRCC3P46736 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRCC3P46736 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
BRCC3P46736 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
BRCC3P46736 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
BRCC3P46736 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRCC3P46736 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.83■□□□□ 0.12
BRCC3P46736 AP002414.2-201ENST00000591780 3365 ntBASIC15.83■□□□□ 0.12
BRCC3P46736 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRCC3P46736 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRCC3P46736 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRCC3P46736 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.83■□□□□ 0.12
BRCC3P46736 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
BRCC3P46736 AC068418.2-201ENST00000577309 3703 ntBASIC15.82■□□□□ 0.12
BRCC3P46736 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCC3P46736 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
BRCC3P46736 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 MIR769-201ENST00000390225 118 ntBASIC15.82■□□□□ 0.12
BRCC3P46736 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
BRCC3P46736 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 AL662890.1-201ENST00000396818 632 ntBASIC15.82■□□□□ 0.12
BRCC3P46736 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCC3P46736 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCC3P46736 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCC3P46736 MARK2P5-201ENST00000507649 634 ntBASIC15.82■□□□□ 0.12
BRCC3P46736 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
BRCC3P46736 CHMP4BP1-201ENST00000556017 588 ntBASIC15.82■□□□□ 0.12
BRCC3P46736 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.82■□□□□ 0.12
BRCC3P46736 SNORD3B-2-202ENST00000571722 791 ntBASIC15.82■□□□□ 0.12
BRCC3P46736 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
BRCC3P46736 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.82■□□□□ 0.12
BRCC3P46736 MIR6720-201ENST00000611664 98 ntBASIC15.82■□□□□ 0.12
BRCC3P46736 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 AC138627.1-207ENST00000641560 1006 ntBASIC15.82■□□□□ 0.12
BRCC3P46736 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.82■□□□□ 0.12
BRCC3P46736 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCC3P46736 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.82■□□□□ 0.12
BRCC3P46736 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCC3P46736 AC136759.1-202ENST00000530858 2194 ntBASIC15.82■□□□□ 0.12
BRCC3P46736 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
BRCC3P46736 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
BRCC3P46736 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
BRCC3P46736 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.81■□□□□ 0.12
BRCC3P46736 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.81■□□□□ 0.12
BRCC3P46736 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCC3P46736 AC011742.3-201ENST00000439053 820 ntBASIC15.81■□□□□ 0.12
BRCC3P46736 AC012441.2-201ENST00000444843 739 ntBASIC15.81■□□□□ 0.12
BRCC3P46736 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
BRCC3P46736 HLA-J-204ENST00000495278 958 ntBASIC15.81■□□□□ 0.12
BRCC3P46736 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.81■□□□□ 0.12
BRCC3P46736 SCARNA21-201ENST00000517026 139 ntBASIC15.81■□□□□ 0.12
BRCC3P46736 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
BRCC3P46736 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 376.9 ms