Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.42■□□□□ 0.22
USP8P40818 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
USP8P40818 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.42■□□□□ 0.22
USP8P40818 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
USP8P40818 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
USP8P40818 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
USP8P40818 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.42■□□□□ 0.22
USP8P40818 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.42■□□□□ 0.22
USP8P40818 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.42■□□□□ 0.22
USP8P40818 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.42■□□□□ 0.22
USP8P40818 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.42■□□□□ 0.22
USP8P40818 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.42■□□□□ 0.22
USP8P40818 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.42■□□□□ 0.22
USP8P40818 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.42■□□□□ 0.22
USP8P40818 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.42■□□□□ 0.22
USP8P40818 AL662799.1-202ENST00000614205 422 ntBASIC16.42■□□□□ 0.22
USP8P40818 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.42■□□□□ 0.22
USP8P40818 AL138799.1-201ENST00000448213 1675 ntBASIC16.42■□□□□ 0.22
USP8P40818 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.42■□□□□ 0.22
USP8P40818 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
USP8P40818 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.42■□□□□ 0.22
USP8P40818 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.42■□□□□ 0.22
USP8P40818 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
USP8P40818 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.41■□□□□ 0.22
USP8P40818 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.41■□□□□ 0.22
USP8P40818 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
USP8P40818 SPTLC1P1-201ENST00000447199 261 ntBASIC16.41■□□□□ 0.22
USP8P40818 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.41■□□□□ 0.22
USP8P40818 RPL13AP25-201ENST00000484130 612 ntBASIC16.41■□□□□ 0.22
USP8P40818 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 GAPDHP40-201ENST00000505218 1006 ntBASIC16.41■□□□□ 0.22
USP8P40818 AC026410.3-201ENST00000514280 936 ntBASIC16.41■□□□□ 0.22
USP8P40818 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.41■□□□□ 0.22
USP8P40818 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.41■□□□□ 0.22
USP8P40818 AL132655.2-201ENST00000596276 594 ntBASIC16.41■□□□□ 0.22
USP8P40818 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC16.41■□□□□ 0.22
USP8P40818 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.41■□□□□ 0.22
USP8P40818 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.41■□□□□ 0.22
USP8P40818 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 LINC00552-201ENST00000625151 2579 ntBASIC16.41■□□□□ 0.22
USP8P40818 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
USP8P40818 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.41■□□□□ 0.22
USP8P40818 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
USP8P40818 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.41■□□□□ 0.22
USP8P40818 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
USP8P40818 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP8P40818 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.41■□□□□ 0.22
USP8P40818 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
USP8P40818 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.4■□□□□ 0.22
USP8P40818 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.4■□□□□ 0.22
USP8P40818 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
USP8P40818 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC16.4■□□□□ 0.22
USP8P40818 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
USP8P40818 LILRP1-201ENST00000444199 1370 ntBASIC16.4■□□□□ 0.22
USP8P40818 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
USP8P40818 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP8P40818 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
USP8P40818 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
USP8P40818 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP8P40818 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms