Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.23□□□□□ -0.13
PTPN6P29350 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.23□□□□□ -0.13
PTPN6P29350 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.23□□□□□ -0.13
PTPN6P29350 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.23□□□□□ -0.13
PTPN6P29350 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
PTPN6P29350 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.23□□□□□ -0.13
PTPN6P29350 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.23□□□□□ -0.13
PTPN6P29350 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.23□□□□□ -0.13
PTPN6P29350 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PTPN6P29350 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PTPN6P29350 CU639417.3-201ENST00000624240 1404 ntBASIC14.23□□□□□ -0.13
PTPN6P29350 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTPN6P29350 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
PTPN6P29350 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.22□□□□□ -0.13
PTPN6P29350 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.22□□□□□ -0.13
PTPN6P29350 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.22□□□□□ -0.13
PTPN6P29350 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PTPN6P29350 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PTPN6P29350 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PTPN6P29350 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PTPN6P29350 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.22□□□□□ -0.13
PTPN6P29350 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.22□□□□□ -0.13
PTPN6P29350 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.22□□□□□ -0.13
PTPN6P29350 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.22□□□□□ -0.13
PTPN6P29350 AL049840.4-201ENST00000602422 811 ntBASIC14.22□□□□□ -0.13
PTPN6P29350 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.22□□□□□ -0.13
PTPN6P29350 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.22□□□□□ -0.13
PTPN6P29350 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PTPN6P29350 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PTPN6P29350 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.22□□□□□ -0.13
PTPN6P29350 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.22□□□□□ -0.13
PTPN6P29350 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PTPN6P29350 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PTPN6P29350 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PTPN6P29350 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PTPN6P29350 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.21□□□□□ -0.13
PTPN6P29350 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
PTPN6P29350 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.21□□□□□ -0.13
PTPN6P29350 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.21□□□□□ -0.13
PTPN6P29350 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
PTPN6P29350 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
PTPN6P29350 AC005034.1-201ENST00000426657 489 ntBASIC14.21□□□□□ -0.13
PTPN6P29350 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.21□□□□□ -0.13
PTPN6P29350 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.21□□□□□ -0.13
PTPN6P29350 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.21□□□□□ -0.13
PTPN6P29350 GAPDHP21-201ENST00000450301 1010 ntBASIC14.21□□□□□ -0.13
PTPN6P29350 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.21□□□□□ -0.13
PTPN6P29350 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.21□□□□□ -0.13
PTPN6P29350 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.21□□□□□ -0.13
PTPN6P29350 CR383656.12-201ENST00000549567 513 ntBASIC14.21□□□□□ -0.13
PTPN6P29350 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.21□□□□□ -0.13
PTPN6P29350 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.21□□□□□ -0.13
PTPN6P29350 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.21□□□□□ -0.13
PTPN6P29350 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.21□□□□□ -0.13
PTPN6P29350 BRI3BPP1-201ENST00000594224 787 ntBASIC14.21□□□□□ -0.13
PTPN6P29350 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms