Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.83□□□□□ -0.04
VARSP26640 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.83□□□□□ -0.04
VARSP26640 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VARSP26640 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
VARSP26640 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.83□□□□□ -0.04
VARSP26640 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.83□□□□□ -0.04
VARSP26640 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.83□□□□□ -0.04
VARSP26640 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.83□□□□□ -0.04
VARSP26640 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VARSP26640 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.83□□□□□ -0.04
VARSP26640 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.83□□□□□ -0.04
VARSP26640 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.83□□□□□ -0.04
VARSP26640 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.83□□□□□ -0.04
VARSP26640 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.83□□□□□ -0.04
VARSP26640 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
VARSP26640 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.83□□□□□ -0.04
VARSP26640 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.83□□□□□ -0.04
VARSP26640 RRP7BP-205ENST00000566851 833 ntBASIC14.83□□□□□ -0.04
VARSP26640 SAMD11P1-201ENST00000571429 661 ntBASIC14.83□□□□□ -0.04
VARSP26640 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.83□□□□□ -0.04
VARSP26640 CHCHD2P3-201ENST00000603038 451 ntBASIC14.83□□□□□ -0.04
VARSP26640 AC107373.2-201ENST00000607735 490 ntBASIC14.83□□□□□ -0.04
VARSP26640 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.83□□□□□ -0.04
VARSP26640 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.83□□□□□ -0.04
VARSP26640 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.83□□□□□ -0.04
VARSP26640 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VARSP26640 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
VARSP26640 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.83□□□□□ -0.04
VARSP26640 AC140479.7-201ENST00000636301 2332 ntBASIC14.83□□□□□ -0.04
VARSP26640 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
VARSP26640 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
VARSP26640 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VARSP26640 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VARSP26640 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VARSP26640 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
VARSP26640 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VARSP26640 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
VARSP26640 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.82□□□□□ -0.04
VARSP26640 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.82□□□□□ -0.04
VARSP26640 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VARSP26640 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VARSP26640 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
VARSP26640 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VARSP26640 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
VARSP26640 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.82□□□□□ -0.04
VARSP26640 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VARSP26640 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.82□□□□□ -0.04
VARSP26640 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 MIR658-201ENST00000385210 100 ntBASIC14.82□□□□□ -0.04
VARSP26640 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
VARSP26640 AC104457.1-201ENST00000401024 814 ntBASIC14.82□□□□□ -0.04
VARSP26640 AC098850.1-201ENST00000419919 790 ntBASIC14.82□□□□□ -0.04
VARSP26640 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 AC234783.1-201ENST00000441761 496 ntBASIC14.82□□□□□ -0.04
VARSP26640 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.82□□□□□ -0.04
VARSP26640 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC14.82□□□□□ -0.04
VARSP26640 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.82□□□□□ -0.04
VARSP26640 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.82□□□□□ -0.04
VARSP26640 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.82□□□□□ -0.04
VARSP26640 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.82□□□□□ -0.04
VARSP26640 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.82□□□□□ -0.04
VARSP26640 AC008494.3-201ENST00000606615 944 ntBASIC14.82□□□□□ -0.04
VARSP26640 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VARSP26640 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.82□□□□□ -0.04
VARSP26640 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.82□□□□□ -0.04
VARSP26640 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
VARSP26640 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VARSP26640 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VARSP26640 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.82□□□□□ -0.04
VARSP26640 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
VARSP26640 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VARSP26640 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms