Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.854e-10■■□□□ 13.3
U2AF2P26368 KIZ-205ENST00000611685 1915 ntAPPRIS ALT2 TSL 217.79■□□□□ 0.444e-10■■□□□ 13.3
U2AF2P26368 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.184e-10■■□□□ 13.3
U2AF2P26368 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.074e-10■■□□□ 13.3
U2AF2P26368 KIZ-210ENST00000619189 2130 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.384e-10■■□□□ 13.3
U2AF2P26368 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.963e-7■■□□□ 13.3
U2AF2P26368 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.931e-6■■□□□ 13.3
U2AF2P26368 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.087e-8■■□□□ 13.3
U2AF2P26368 ARHGAP18-203ENST00000483367 460 ntTSL 35.36□□□□□ -1.556e-7■■□□□ 13.3
U2AF2P26368 ARHGAP18-202ENST00000463225 464 ntTSL 34.25□□□□□ -1.736e-7■■□□□ 13.3
U2AF2P26368 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.21■■□□□ 1.158e-13■■□□□ 13.3
U2AF2P26368 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.92■□□□□ 0.788e-13■■□□□ 13.3
U2AF2P26368 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.238e-13■■□□□ 13.3
U2AF2P26368 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.49■□□□□ 0.078e-13■■□□□ 13.3
U2AF2P26368 CYTH1-206ENST00000586299 4423 nt15.77■□□□□ 0.112e-9■■□□□ 13.3
U2AF2P26368 CYTH1-207ENST00000586430 573 ntTSL 310.52□□□□□ -0.732e-9■■□□□ 13.3
U2AF2P26368 CCDC142-203ENST00000454193 2309 ntTSL 222.47■■□□□ 1.196e-9■■□□□ 13.3
U2AF2P26368 ESPN-206ENST00000468561 664 ntTSL 216.89■□□□□ 0.296e-7■■□□□ 13.3
U2AF2P26368 ESPN-204ENST00000434576 750 ntTSL 315.96■□□□□ 0.156e-7■■□□□ 13.3
U2AF2P26368 RPSA-204ENST00000458478 874 ntTSL 212.42□□□□□ -0.426e-7■■□□□ 13.3
U2AF2P26368 NABP1-209ENST00000462824 567 ntTSL 48.51□□□□□ -1.056e-7■■□□□ 13.3
U2AF2P26368 PAPD4-207ENST00000504233 2997 ntTSL 1 (best) BASIC13.44□□□□□ -0.264e-7■■□□□ 13.3
U2AF2P26368 PAPD4-201ENST00000296783 3129 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.464e-7■■□□□ 13.3
U2AF2P26368 PAPD4-202ENST00000423041 3223 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.564e-7■■□□□ 13.3
U2AF2P26368 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.654e-7■■□□□ 13.3
U2AF2P26368 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.324e-7■■□□□ 13.3
U2AF2P26368 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.83■■□□□ 1.091e-6■■□□□ 13.3
U2AF2P26368 GREB1-207ENST00000432985 2052 ntTSL 1 (best)14.58□□□□□ -0.081e-13■■□□□ 13.3
U2AF2P26368 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.22e-6■■□□□ 13.3
U2AF2P26368 ATIC-207ENST00000443953 2187 ntTSL 223.5■■□□□ 1.357e-7■■□□□ 13.3
U2AF2P26368 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.27■■□□□ 1.167e-7■■□□□ 13.3
U2AF2P26368 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.047e-7■■□□□ 13.3
U2AF2P26368 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.24■■□□□ 1.472e-6■■□□□ 13.3
U2AF2P26368 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.97■□□□□ 0.472e-6■■□□□ 13.3
U2AF2P26368 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.062e-6■■□□□ 13.3
U2AF2P26368 PARN-201ENST00000341484 2100 ntTSL 2 BASIC9.13□□□□□ -0.952e-6■■□□□ 13.3
U2AF2P26368 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.71■■□□□ 1.071e-6■■□□□ 13.3
U2AF2P26368 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.829e-9■■□□□ 13.3
U2AF2P26368 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.39■□□□□ 0.531e-6■■□□□ 13.3
U2AF2P26368 ABCC5-209ENST00000443376 2000 ntTSL 1 (best)16.01■□□□□ 0.151e-6■■□□□ 13.3
U2AF2P26368 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC9.36□□□□□ -0.911e-6■■□□□ 13.3
U2AF2P26368 FGL1-210ENST00000522636 773 ntTSL 23.75□□□□□ -1.816e-7■■□□□ 13.3
U2AF2P26368 MCEE-203ENST00000462609 633 ntTSL 39.55□□□□□ -0.886e-7■■□□□ 13.3
U2AF2P26368 MCEE-202ENST00000413592 523 ntTSL 21.29□□□□□ -2.26e-7■■□□□ 13.3
U2AF2P26368 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.056e-7■■□□□ 13.3
U2AF2P26368 STK24-202ENST00000376554 3602 ntTSL 512.63□□□□□ -0.396e-7■■□□□ 13.3
U2AF2P26368 YWHAZ-223ENST00000523938 626 ntTSL 522.55■■□□□ 1.27e-10■■□□□ 13.3
U2AF2P26368 YWHAZ-221ENST00000523131 567 ntTSL 522.22■■□□□ 1.157e-10■■□□□ 13.3
U2AF2P26368 YWHAZ-208ENST00000418997 996 ntTSL 221.88■■□□□ 1.097e-10■■□□□ 13.3
U2AF2P26368 YWHAZ-210ENST00000437293 701 ntTSL 321.46■■□□□ 1.037e-10■■□□□ 13.3
U2AF2P26368 CABIN1-208ENST00000467937 593 ntTSL 320.99■□□□□ 0.953e-9■■□□□ 13.3
U2AF2P26368 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.33e-9■■□□□ 13.3
U2AF2P26368 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.323e-9■■□□□ 13.3
U2AF2P26368 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.393e-9■■□□□ 13.3
U2AF2P26368 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.493e-9■■□□□ 13.3
U2AF2P26368 RBM39-244ENST00000615771 686 ntTSL 56.63□□□□□ -1.352e-33■■□□□ 13.3
U2AF2P26368 ETNK1-203ENST00000538218 1659 ntTSL 1 (best)18.69■□□□□ 0.586e-7■■□□□ 13.3
U2AF2P26368 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.266e-7■■□□□ 13.3
U2AF2P26368 IDH1-202ENST00000415282 942 ntTSL 219.16■□□□□ 0.662e-51■■□□□ 13.3
U2AF2P26368 CCNL1-211ENST00000468977 793 ntTSL 52.52□□□□□ -2.016e-7■■□□□ 13.3
U2AF2P26368 PTK2-203ENST00000430260 1940 ntTSL 2 BASIC10.1□□□□□ -0.793e-7■■□□□ 13.3
U2AF2P26368 PTK2-253ENST00000523805 440 ntTSL 38.77□□□□□ -1.013e-7■■□□□ 13.3
U2AF2P26368 PTK2-221ENST00000520460 572 ntTSL 47.69□□□□□ -1.183e-7■■□□□ 13.3
U2AF2P26368 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.3□□□□□ -1.43e-7■■□□□ 13.3
U2AF2P26368 AGFG1-207ENST00000458212 815 ntTSL 23.7□□□□□ -1.821e-6■■□□□ 13.3
U2AF2P26368 ERBIN-215ENST00000511671 589 ntTSL 31.03□□□□□ -2.249e-7■■□□□ 13.3
U2AF2P26368 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.562e-8■■□□□ 13.3
U2AF2P26368 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.23e-7■■□□□ 13.3
U2AF2P26368 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.033e-7■■□□□ 13.3
U2AF2P26368 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.93e-7■■□□□ 13.3
U2AF2P26368 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.763e-7■■□□□ 13.3
U2AF2P26368 RFWD2-207ENST00000474194 975 ntTSL 328.66■■■□□ 2.183e-6■■□□□ 13.2
U2AF2P26368 ACIN1-211ENST00000554708 736 ntTSL 26.24□□□□□ -1.411e-9■■□□□ 13.2
U2AF2P26368 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.436e-7■■□□□ 13.2
U2AF2P26368 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.26e-7■■□□□ 13.2
U2AF2P26368 REC8-212ENST00000619469 2720 ntTSL 213.08□□□□□ -0.326e-7■■□□□ 13.2
U2AF2P26368 IGF2BP3-214ENST00000492771 564 ntTSL 415.03■□□□□ -03e-7■■□□□ 13.2
U2AF2P26368 IGF2BP3-209ENST00000474105 663 ntTSL 46.09□□□□□ -1.433e-7■■□□□ 13.2
U2AF2P26368 INTS10-213ENST00000522114 623 ntTSL 423.8■■□□□ 1.44e-6■■□□□ 13.2
U2AF2P26368 INTS10-203ENST00000518424 556 ntTSL 422.45■■□□□ 1.184e-6■■□□□ 13.2
U2AF2P26368 INTS10-211ENST00000521758 471 ntTSL 220.35■□□□□ 0.854e-6■■□□□ 13.2
U2AF2P26368 INTS10-218ENST00000523869 528 ntTSL 516.02■□□□□ 0.164e-6■■□□□ 13.2
U2AF2P26368 USP48-205ENST00000421625 2818 ntTSL 2 BASIC25.41■■□□□ 1.663e-6■■□□□ 13.2
U2AF2P26368 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.172e-6■■□□□ 13.2
U2AF2P26368 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.07■□□□□ 0.962e-6■■□□□ 13.2
U2AF2P26368 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC17.1■□□□□ 0.332e-6■■□□□ 13.2
U2AF2P26368 INTS6-204ENST00000460868 704 ntTSL 33.99□□□□□ -1.771e-7■■□□□ 13.2
U2AF2P26368 SMARCD1-209ENST00000550477 911 ntTSL 325.27■■□□□ 1.644e-7■■□□□ 13.2
U2AF2P26368 SMARCD1-212ENST00000551966 881 ntTSL 523.55■■□□□ 1.364e-7■■□□□ 13.2
U2AF2P26368 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC23.35■■□□□ 1.334e-7■■□□□ 13.2
U2AF2P26368 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.474e-7■■□□□ 13.2
U2AF2P26368 EIF3G-210ENST00000590158 1034 ntTSL 217.9■□□□□ 0.461e-20■■□□□ 13.2
U2AF2P26368 EIF3G-207ENST00000589009 1522 ntTSL 217.23■□□□□ 0.351e-20■■□□□ 13.2
U2AF2P26368 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.271e-20■■□□□ 13.2
U2AF2P26368 EIF3G-206ENST00000588709 828 ntTSL 515.42■□□□□ 0.061e-20■■□□□ 13.2
U2AF2P26368 EIF3G-202ENST00000587146 709 ntTSL 514.52□□□□□ -0.091e-20■■□□□ 13.2
U2AF2P26368 EIF3G-213ENST00000593054 453 ntTSL 512.18□□□□□ -0.461e-20■■□□□ 13.2
U2AF2P26368 SMARCD1-205ENST00000548573 2095 ntTSL 5 BASIC11.59□□□□□ -0.554e-7■■□□□ 13.2
U2AF2P26368 EIF3G-208ENST00000589454 873 ntTSL 511.57□□□□□ -0.561e-20■■□□□ 13.2
U2AF2P26368 DDB2-213ENST00000617847 1649 ntTSL 514.07□□□□□ -0.161e-6■■□□□ 13.2
Retrieved 100 of 36,523 protein–RNA pairs in 179.9 ms