RNA–Protein interactions for RNA: ENST00000454193.5

CCDC142-203, Transcript of coiled-coil domain containing 142, humanhuman

TSL 2

Gene CCDC142, Length 2,309 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-203ENST00000454193 NISCHQ9Y2I1 1504 aa40.59■■■■■ 4.09
CCDC142-203ENST00000454193 CCDC180Q9P1Z9 1646 aa34.61■■■■□ 3.13
CCDC142-203ENST00000454193 SHROOM4Q9ULL8 1493 aa34.41■■■■□ 3.1
CCDC142-203ENST00000454193 ZCCHC6Q5VYS8 1495 aaKnown RBP34.32■■■■□ 3.08
CCDC142-203ENST00000454193 SUPT5HO00267 1087 aaKnown RBP33.74■■■□□ 2.99
CCDC142-203ENST00000454193 DCAF8L2P0C7V8 631 aa33.59■■■□□ 2.97
CCDC142-203ENST00000454193 DCAF1Q9Y4B6 1507 aa33.38■■■□□ 2.93
CCDC142-203ENST00000454193 CHIC1Q5VXU3 224 aa32.79■■■□□ 2.84
CCDC142-203ENST00000454193 MYO15BQ96JP2 1530 aa32.57■■■□□ 2.8
CCDC142-203ENST00000454193 ABCC9O60706 1549 aa32.36■■■□□ 2.77
CCDC142-203ENST00000454193 SCRIBQ14160 1630 aa32.32■■■□□ 2.76
CCDC142-203ENST00000454193 RSF1Q96T23 1441 aaPredicted RBP32.06■■■□□ 2.72
CCDC142-203ENST00000454193 NACADO15069 1562 aa32.02■■■□□ 2.72
CCDC142-203ENST00000454193 LOC105371045A0A1W2PR82 267 aa31.76■■■□□ 2.67
CCDC142-203ENST00000454193 RB1CC1Q8TDY2 1594 aa31.73■■■□□ 2.67
CCDC142-203ENST00000454193 PCGF6Q9BYE7 350 aa31.65■■■□□ 2.66
CCDC142-203ENST00000454193 HRCP23327 699 aa31.63■■■□□ 2.65
CCDC142-203ENST00000454193 CECR2Q9BXF3 1484 aa31.59■■■□□ 2.65
CCDC142-203ENST00000454193 TRIM41Q8WV44 630 aa31.5■■■□□ 2.63
CCDC142-203ENST00000454193 MROH2BQ7Z745 1585 aa31.5■■■□□ 2.63
CCDC142-203ENST00000454193 WIZO95785 1651 aa31.32■■■□□ 2.6
CCDC142-203ENST00000454193 BAZ1AQ9NRL2 1556 aaPredicted RBP31.21■■■□□ 2.59
CCDC142-203ENST00000454193 TRIM26Q12899 539 aaPredicted RBP31.16■■■□□ 2.58
CCDC142-203ENST00000454193 FAM9AQ8IZU1 332 aaPredicted RBP31.14■■■□□ 2.58
CCDC142-203ENST00000454193 UNC13AQ9UPW8 1703 aa30.96■■■□□ 2.55
CCDC142-203ENST00000454193 SMARCA4P51532 1647 aa30.92■■■□□ 2.54
CCDC142-203ENST00000454193 TOP2AP11388 1531 aaKnown RBP30.89■■■□□ 2.54
CCDC142-203ENST00000454193 EIF4G1Q04637 1599 aaKnown RBP30.88■■■□□ 2.53
CCDC142-203ENST00000454193 PPARGC1BQ86YN6 1023 aaKnown RBP30.87■■■□□ 2.53
CCDC142-203ENST00000454193 EHMT2Q96KQ7 1210 aa30.82■■■□□ 2.52
CCDC142-203ENST00000454193 CCDC88BA6NC98 1476 aa30.73■■■□□ 2.51
CCDC142-203ENST00000454193 SMARCA2P51531 1590 aa30.69■■■□□ 2.5
CCDC142-203ENST00000454193 BICRAQ9NZM4 1560 aa30.58■■■□□ 2.49
CCDC142-203ENST00000454193 PABPN1Q86U42 306 aaKnown RBP eCLIP30.58■■■□□ 2.49
CCDC142-203ENST00000454193 ABCC8Q09428 1581 aa30.57■■■□□ 2.48
CCDC142-203ENST00000454193 ZEB1P37275 1124 aaPredicted RBP30.49■■■□□ 2.47
CCDC142-203ENST00000454193 PEG3Q9GZU2 1588 aa30.38■■■□□ 2.45
CCDC142-203ENST00000454193 SOGA1O94964 1423 aa30.28■■■□□ 2.44
CCDC142-203ENST00000454193 EEA1Q15075 1411 aa30.24■■■□□ 2.43
CCDC142-203ENST00000454193 CSRNP3Q8WYN3 585 aa30.16■■■□□ 2.42
CCDC142-203ENST00000454193 ATAD2BQ9ULI0 1458 aa30.15■■■□□ 2.42
CCDC142-203ENST00000454193 WRNQ14191 1432 aaPredicted RBP eCLIP30.15■■■□□ 2.42
CCDC142-203ENST00000454193 CEP162Q5TB80 1403 aa30.14■■■□□ 2.42
CCDC142-203ENST00000454193 TNIKQ9UKE5 1360 aa30.13■■■□□ 2.41
CCDC142-203ENST00000454193 RUSC2Q8N2Y8 1516 aa30.1■■■□□ 2.41
CCDC142-203ENST00000454193 BAZ1BQ9UIG0 1483 aaKnown RBP30.08■■■□□ 2.41
CCDC142-203ENST00000454193 UBTFP17480 764 aaKnown RBP30.02■■■□□ 2.4
CCDC142-203ENST00000454193 GOLGA3Q08378 1498 aa29.98■■■□□ 2.39
CCDC142-203ENST00000454193 SYNJ1O43426 1573 aa29.96■■■□□ 2.39
CCDC142-203ENST00000454193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.85■■■□□ 2.37
CCDC142-203ENST00000454193 CEP164Q9UPV0 1460 aa29.84■■■□□ 2.37
CCDC142-203ENST00000454193 CCER1Q8TC90 406 aaPredicted RBP29.82■■■□□ 2.36
CCDC142-203ENST00000454193 TTBK1Q5TCY1 1321 aaPredicted RBP29.81■■■□□ 2.36
CCDC142-203ENST00000454193 KIF21BO75037 1637 aa29.78■■■□□ 2.36
CCDC142-203ENST00000454193 TOP2BQ02880 1626 aa29.65■■■□□ 2.34
CCDC142-203ENST00000454193 NCAPD3P42695 1498 aa29.62■■■□□ 2.33
CCDC142-203ENST00000454193 CLIP1P30622 1438 aa29.62■■■□□ 2.33
CCDC142-203ENST00000454193 HMGXB3Q12766 1538 aa29.61■■■□□ 2.33
CCDC142-203ENST00000454193 RAPGEF2Q9Y4G8 1499 aa29.57■■■□□ 2.32
CCDC142-203ENST00000454193 BIVM-ERCC5R4GMW8 1640 aa29.54■■■□□ 2.32
CCDC142-203ENST00000454193 PELP1Q8IZL8 1130 aaKnown RBP29.52■■■□□ 2.32
CCDC142-203ENST00000454193 VPS8Q8N3P4 1428 aa29.49■■■□□ 2.31
CCDC142-203ENST00000454193 APLP2Q06481 763 aa29.38■■■□□ 2.29
CCDC142-203ENST00000454193 ERICH3Q5RHP9 1530 aa29.35■■■□□ 2.29
CCDC142-203ENST00000454193 CFTRP13569 1480 aa29.35■■■□□ 2.29
CCDC142-203ENST00000454193 RANGAP1P46060 587 aaPredicted RBP29.34■■■□□ 2.29
CCDC142-203ENST00000454193 CUX1P39880 1505 aa29.34■■■□□ 2.29
CCDC142-203ENST00000454193 PRXQ9BXM0 1461 aa29.33■■■□□ 2.29
CCDC142-203ENST00000454193 KIF27Q86VH2 1401 aa29.25■■■□□ 2.27
CCDC142-203ENST00000454193 HNRNPUL2Q1KMD3 747 aaKnown RBP29.24■■■□□ 2.27
CCDC142-203ENST00000454193 DIEXFQ68CQ4 756 aaKnown RBP29.18■■■□□ 2.26
CCDC142-203ENST00000454193 ARAP1Q96P48 1450 aa29.12■■■□□ 2.25
CCDC142-203ENST00000454193 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
CCDC142-203ENST00000454193 CADPSQ9ULU8 1353 aa29.04■■■□□ 2.24
CCDC142-203ENST00000454193 ZNF316A6NFI3 1004 aaPredicted RBP29.01■■■□□ 2.23
CCDC142-203ENST00000454193 SCAF1Q9H7N4 1312 aaKnown RBP29.01■■■□□ 2.23
CCDC142-203ENST00000454193 CUX2O14529 1486 aa28.94■■■□□ 2.22
CCDC142-203ENST00000454193 KANK4Q5T7N3 995 aaPredicted RBP28.92■■■□□ 2.22
CCDC142-203ENST00000454193 IGF1RP08069 1367 aa28.9■■■□□ 2.22
CCDC142-203ENST00000454193 ARHGAP35Q9NRY4 1499 aa28.9■■■□□ 2.22
CCDC142-203ENST00000454193 CC2D2AQ9P2K1 1620 aa28.86■■■□□ 2.21
CCDC142-203ENST00000454193 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
CCDC142-203ENST00000454193 ACIN1Q9UKV3 1341 aaKnown RBP28.85■■■□□ 2.21
CCDC142-203ENST00000454193 CARMIL1Q5VZK9 1371 aa28.79■■■□□ 2.2
CCDC142-203ENST00000454193 RRBP1Q9P2E9 1410 aaKnown RBP28.79■■■□□ 2.2
CCDC142-203ENST00000454193 CENPBP07199 599 aaPredicted RBP28.78■■■□□ 2.2
CCDC142-203ENST00000454193 NEUROD1Q13562 356 aa28.77■■■□□ 2.2
CCDC142-203ENST00000454193 CLSPNQ9HAW4 1339 aa28.76■■■□□ 2.19
CCDC142-203ENST00000454193 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
CCDC142-203ENST00000454193 DHX57Q6P158 1386 aaKnown RBP28.7■■■□□ 2.18
CCDC142-203ENST00000454193 CCNB3Q8WWL7 1395 aa28.67■■■□□ 2.18
CCDC142-203ENST00000454193 MAP3K1Q13233 1512 aa28.61■■■□□ 2.17
CCDC142-203ENST00000454193 DNMBPQ6XZF7 1577 aa28.61■■■□□ 2.17
CCDC142-203ENST00000454193 TIAM1Q13009 1591 aa28.58■■■□□ 2.17
CCDC142-203ENST00000454193 ABCA10Q8WWZ4 1543 aa28.54■■■□□ 2.16
CCDC142-203ENST00000454193 RAD54L2Q9Y4B4 1467 aa28.54■■■□□ 2.16
CCDC142-203ENST00000454193 TOPBP1Q92547 1522 aa28.54■■■□□ 2.16
CCDC142-203ENST00000454193 FHAD1B1AJZ9 1412 aa28.53■■■□□ 2.16
CCDC142-203ENST00000454193 POLA1P09884 1462 aaPredicted RBP28.52■■■□□ 2.16
CCDC142-203ENST00000454193 MIER1Q8N108 512 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms