RNA–Protein interactions for RNA: ENST00000223122.3

C1GALT1-201, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1GALT1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-201ENST00000223122 DCAF8L2P0C7V8 631 aa14.11□□□□□ -0.15
C1GALT1-201ENST00000223122 NISCHQ9Y2I1 1504 aa13.76□□□□□ -0.21
C1GALT1-201ENST00000223122 SUPT5HO00267 1087 aaKnown RBP13.64□□□□□ -0.23
C1GALT1-201ENST00000223122 SHROOM4Q9ULL8 1493 aa13.52□□□□□ -0.24
C1GALT1-201ENST00000223122 EHMT2Q96KQ7 1210 aa13.31□□□□□ -0.28
C1GALT1-201ENST00000223122 PCGF6Q9BYE7 350 aa12.9□□□□□ -0.34
C1GALT1-201ENST00000223122 FAM9AQ8IZU1 332 aaPredicted RBP12.88□□□□□ -0.35
C1GALT1-201ENST00000223122 TTBK1Q5TCY1 1321 aaPredicted RBP12.86□□□□□ -0.35
C1GALT1-201ENST00000223122 APLP2Q06481 763 aa12.68□□□□□ -0.38
C1GALT1-201ENST00000223122 PELP1Q8IZL8 1130 aaKnown RBP12.66□□□□□ -0.38
C1GALT1-201ENST00000223122 RANGAP1P46060 587 aaPredicted RBP12.61□□□□□ -0.39
C1GALT1-201ENST00000223122 TRIM41Q8WV44 630 aa12.55□□□□□ -0.4
C1GALT1-201ENST00000223122 CCER1Q8TC90 406 aaPredicted RBP12.52□□□□□ -0.4
C1GALT1-201ENST00000223122 PPARGC1BQ86YN6 1023 aaKnown RBP12.47□□□□□ -0.41
C1GALT1-201ENST00000223122 ZEB1P37275 1124 aaPredicted RBP12.46□□□□□ -0.41
C1GALT1-201ENST00000223122 CENPBP07199 599 aaPredicted RBP12.44□□□□□ -0.42
C1GALT1-201ENST00000223122 YTHDC1Q96MU7 727 aaKnown RBP12.41□□□□□ -0.42
C1GALT1-201ENST00000223122 ATP1B4Q9UN42 357 aaPredicted RBP12.36□□□□□ -0.43
C1GALT1-201ENST00000223122 UBTFP17480 764 aaKnown RBP12.36□□□□□ -0.43
C1GALT1-201ENST00000223122 ERICH6Q7L0X2 663 aa12.29□□□□□ -0.44
C1GALT1-201ENST00000223122 HRCP23327 699 aa12.28□□□□□ -0.44
C1GALT1-201ENST00000223122 LOC105371045A0A1W2PR82 267 aa12.28□□□□□ -0.44
C1GALT1-201ENST00000223122 TRIM26Q12899 539 aaPredicted RBP12.27□□□□□ -0.45
C1GALT1-201ENST00000223122 CHIC1Q5VXU3 224 aa12.17□□□□□ -0.46
C1GALT1-201ENST00000223122 NEFLP07196 543 aa12.1□□□□□ -0.47
C1GALT1-201ENST00000223122 ITGAEP38570 1179 aa12.07□□□□□ -0.48
C1GALT1-201ENST00000223122 HNRNPUL2Q1KMD3 747 aaKnown RBP12.03□□□□□ -0.48
C1GALT1-201ENST00000223122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12□□□□□ -0.49
C1GALT1-201ENST00000223122 MYT1Q01538 1121 aa11.92□□□□□ -0.5
C1GALT1-201ENST00000223122 POLR3GLQ9BT43 218 aa11.91□□□□□ -0.5
C1GALT1-201ENST00000223122 CNGB1Q14028 1251 aaPredicted RBP11.9□□□□□ -0.5
C1GALT1-201ENST00000223122 DIEXFQ68CQ4 756 aaKnown RBP11.89□□□□□ -0.51
C1GALT1-201ENST00000223122 GTF3C3Q9Y5Q9 886 aa11.74□□□□□ -0.53
C1GALT1-201ENST00000223122 FAM50AQ14320 339 aaKnown RBP11.72□□□□□ -0.53
C1GALT1-201ENST00000223122 ABCC9O60706 1549 aa11.72□□□□□ -0.53
C1GALT1-201ENST00000223122 MYT1LQ9UL68 1186 aa11.71□□□□□ -0.53
C1GALT1-201ENST00000223122 BCANQ96GW7 911 aa11.71□□□□□ -0.54
C1GALT1-201ENST00000223122 NEUROD1Q13562 356 aa11.7□□□□□ -0.54
C1GALT1-201ENST00000223122 PABPN1Q86U42 306 aaKnown RBP eCLIP11.7□□□□□ -0.54
C1GALT1-201ENST00000223122 DAXXQ9UER7 740 aaPredicted RBP11.68□□□□□ -0.54
C1GALT1-201ENST00000223122 TRIM52Q96A61 297 aa11.6□□□□□ -0.55
C1GALT1-201ENST00000223122 ZNF316A6NFI3 1004 aaPredicted RBP11.58□□□□□ -0.56
C1GALT1-201ENST00000223122 SLC4A1APQ9BWU0 796 aaKnown RBP11.57□□□□□ -0.56
C1GALT1-201ENST00000223122 ACIN1Q9UKV3 1341 aaKnown RBP11.55□□□□□ -0.56
C1GALT1-201ENST00000223122 SCRIBQ14160 1630 aa11.53□□□□□ -0.56
C1GALT1-201ENST00000223122 ANP32CO43423 234 aa11.5□□□□□ -0.57
C1GALT1-201ENST00000223122 ZNF326Q5BKZ1 582 aaKnown RBP11.5□□□□□ -0.57
C1GALT1-201ENST00000223122 RTL5Q5HYW3 569 aaPredicted RBP11.5□□□□□ -0.57
C1GALT1-201ENST00000223122 P3H3Q8IVL6 736 aa11.48□□□□□ -0.57
C1GALT1-201ENST00000223122 CLSPNQ9HAW4 1339 aa11.48□□□□□ -0.57
C1GALT1-201ENST00000223122 MYO15BQ96JP2 1530 aa11.46□□□□□ -0.58
C1GALT1-201ENST00000223122 DCAF1Q9Y4B6 1507 aa11.45□□□□□ -0.58
C1GALT1-201ENST00000223122 ARID3CA6NKF2 412 aa11.44□□□□□ -0.58
C1GALT1-201ENST00000223122 ZCCHC6Q5VYS8 1495 aaKnown RBP11.43□□□□□ -0.58
C1GALT1-201ENST00000223122 CDK11AQ9UQ88 783 aaPredicted RBP11.42□□□□□ -0.58
C1GALT1-201ENST00000223122 CSRNP3Q8WYN3 585 aa11.42□□□□□ -0.58
C1GALT1-201ENST00000223122 FBLN2P98095 1184 aa11.34□□□□□ -0.59
C1GALT1-201ENST00000223122 SCAF1Q9H7N4 1312 aaKnown RBP11.33□□□□□ -0.6
C1GALT1-201ENST00000223122 FKBP8Q14318 412 aa11.33□□□□□ -0.6
C1GALT1-201ENST00000223122 BCL11AQ9H165 835 aa11.29□□□□□ -0.6
C1GALT1-201ENST00000223122 NPM2Q86SE8 214 aaKnown RBP11.28□□□□□ -0.6
C1GALT1-201ENST00000223122 ZNF777Q9ULD5 760 aaPredicted RBP11.27□□□□□ -0.6
C1GALT1-201ENST00000223122 DDX10Q13206 875 aaKnown RBP11.27□□□□□ -0.61
C1GALT1-201ENST00000223122 CANXP27824 592 aaKnown RBP11.25□□□□□ -0.61
C1GALT1-201ENST00000223122 CCDC180Q9P1Z9 1646 aa11.24□□□□□ -0.61
C1GALT1-201ENST00000223122 MIER1Q8N108 512 aa11.23□□□□□ -0.61
C1GALT1-201ENST00000223122 TONSLQ96HA7 1378 aa11.22□□□□□ -0.61
C1GALT1-201ENST00000223122 HNRNPUQ00839 825 aaKnown RBP eCLIP11.21□□□□□ -0.61
C1GALT1-201ENST00000223122 FAM9BQ8IZU0 186 aa11.21□□□□□ -0.61
C1GALT1-201ENST00000223122 ANP32AP39687 249 aaKnown RBP11.21□□□□□ -0.62
C1GALT1-201ENST00000223122 HIRIP3Q9BW71 556 aaPredicted RBP11.2□□□□□ -0.62
C1GALT1-201ENST00000223122 CHIC2Q9UKJ5 165 aa11.17□□□□□ -0.62
C1GALT1-201ENST00000223122 SALL2Q9Y467 1007 aaPredicted RBP11.17□□□□□ -0.62
C1GALT1-201ENST00000223122 IRX6P78412 446 aaPredicted RBP11.17□□□□□ -0.62
C1GALT1-201ENST00000223122 SLC24A1O60721 1099 aa11.14□□□□□ -0.63
C1GALT1-201ENST00000223122 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
C1GALT1-201ENST00000223122 NBR1Q14596 966 aa11.11□□□□□ -0.63
C1GALT1-201ENST00000223122 CLIP1P30622 1438 aa11.11□□□□□ -0.63
C1GALT1-201ENST00000223122 CEP162Q5TB80 1403 aa11.1□□□□□ -0.63
C1GALT1-201ENST00000223122 RSF1Q96T23 1441 aaPredicted RBP11.09□□□□□ -0.63
C1GALT1-201ENST00000223122 GOLGA3Q08378 1498 aa11.05□□□□□ -0.64
C1GALT1-201ENST00000223122 SENP3-EIF4A1A0A087X0R7 540 aa11.05□□□□□ -0.64
C1GALT1-201ENST00000223122 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
C1GALT1-201ENST00000223122 CHGAP10645 457 aaKnown RBP11.04□□□□□ -0.64
C1GALT1-201ENST00000223122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.04□□□□□ -0.642e-7■□□□□ 9.2
C1GALT1-201ENST00000223122 MRS2Q9HD23 443 aa11.04□□□□□ -0.64
C1GALT1-201ENST00000223122 CCDC136Q96JN2 1154 aa11.04□□□□□ -0.64
C1GALT1-201ENST00000223122 NEFMP07197 916 aa11.03□□□□□ -0.64
C1GALT1-201ENST00000223122 TMC1Q8TDI8 760 aa11.02□□□□□ -0.65
C1GALT1-201ENST00000223122 RRP7BPQ9NSQ0 103 aa11.02□□□□□ -0.65
C1GALT1-201ENST00000223122 MTUS2Q5JR59 1369 aa11□□□□□ -0.65
C1GALT1-201ENST00000223122 EIF5BO60841 1220 aaKnown RBP11□□□□□ -0.65
C1GALT1-201ENST00000223122 ARXQ96QS3 562 aa10.98□□□□□ -0.65
C1GALT1-201ENST00000223122 RB1CC1Q8TDY2 1594 aa10.95□□□□□ -0.66
C1GALT1-201ENST00000223122 SENP3Q9H4L4 574 aaPredicted RBP10.94□□□□□ -0.66
C1GALT1-201ENST00000223122 HSP90AA1P07900 732 aaKnown RBP10.94□□□□□ -0.66
C1GALT1-201ENST00000223122 WRNQ14191 1432 aaPredicted RBP eCLIP10.94□□□□□ -0.66
C1GALT1-201ENST00000223122 WDR43Q15061 677 aaKnown RBP eCLIP10.94□□□□□ -0.66
C1GALT1-201ENST00000223122 PLPPR3Q6T4P5 718 aa10.94□□□□□ -0.66
C1GALT1-201ENST00000223122 EIF4G2P78344 907 aaKnown RBP eCLIP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms