Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2B1P20020 AP006294.1-201ENST00000415407 339 ntBASIC17.32■□□□□ 0.36
ATP2B1P20020 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP2B1P20020 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.32■□□□□ 0.36
ATP2B1P20020 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP2B1P20020 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ATP2B1P20020 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2B1P20020 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP2B1P20020 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ATP2B1P20020 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP2B1P20020 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP2B1P20020 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP2B1P20020 PRSS30P-206ENST00000641773 873 ntBASIC17.32■□□□□ 0.36
ATP2B1P20020 AC105233.6-201ENST00000642093 218 ntBASIC17.32■□□□□ 0.36
ATP2B1P20020 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2B1P20020 AC023908.3-201ENST00000564211 3047 ntBASIC17.32■□□□□ 0.36
ATP2B1P20020 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2B1P20020 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2B1P20020 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2B1P20020 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2B1P20020 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2B1P20020 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2B1P20020 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP2B1P20020 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP2B1P20020 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2B1P20020 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ATP2B1P20020 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2B1P20020 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP2B1P20020 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATP2B1P20020 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP2B1P20020 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP2B1P20020 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP2B1P20020 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP2B1P20020 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP2B1P20020 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP2B1P20020 RN7SL752P-201ENST00000463779 287 ntBASIC17.31■□□□□ 0.36
ATP2B1P20020 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.31■□□□□ 0.36
ATP2B1P20020 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
ATP2B1P20020 ENPP7P5-201ENST00000541031 1031 ntBASIC17.31■□□□□ 0.36
ATP2B1P20020 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.31■□□□□ 0.36
ATP2B1P20020 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP2B1P20020 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ATP2B1P20020 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 AC232323.1-201ENST00000540724 2099 ntBASIC17.31■□□□□ 0.36
ATP2B1P20020 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATP2B1P20020 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATP2B1P20020 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
ATP2B1P20020 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATP2B1P20020 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ATP2B1P20020 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ATP2B1P20020 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2B1P20020 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATP2B1P20020 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP2B1P20020 AC055811.4-201ENST00000624039 1754 ntBASIC17.3■□□□□ 0.36
ATP2B1P20020 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP2B1P20020 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ATP2B1P20020 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2B1P20020 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP2B1P20020 AC140479.7-201ENST00000636301 2332 ntBASIC17.3■□□□□ 0.36
ATP2B1P20020 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP2B1P20020 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2B1P20020 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
ATP2B1P20020 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2B1P20020 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP2B1P20020 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2B1P20020 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ATP2B1P20020 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP2B1P20020 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP2B1P20020 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP2B1P20020 AC114812.1-204ENST00000449669 728 ntBASIC17.3■□□□□ 0.36
ATP2B1P20020 RN7SL692P-201ENST00000464677 288 ntBASIC17.3■□□□□ 0.36
ATP2B1P20020 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP2B1P20020 AP001063.1-201ENST00000568332 529 ntBASIC17.3■□□□□ 0.36
ATP2B1P20020 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP2B1P20020 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP2B1P20020 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2B1P20020 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms