Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.4■□□□□ 0.06
ERCC2P18074 AL035252.4-201ENST00000624174 288 ntBASIC15.4■□□□□ 0.06
ERCC2P18074 AC005912.2-201ENST00000619492 2400 ntBASIC15.4■□□□□ 0.06
ERCC2P18074 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.4■□□□□ 0.06
ERCC2P18074 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ERCC2P18074 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.4■□□□□ 0.06
ERCC2P18074 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.4■□□□□ 0.06
ERCC2P18074 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.4■□□□□ 0.06
ERCC2P18074 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.4■□□□□ 0.06
ERCC2P18074 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.4■□□□□ 0.06
ERCC2P18074 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.4■□□□□ 0.06
ERCC2P18074 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.06
ERCC2P18074 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
ERCC2P18074 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.39■□□□□ 0.05
ERCC2P18074 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ERCC2P18074 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
ERCC2P18074 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.39■□□□□ 0.05
ERCC2P18074 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ERCC2P18074 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
ERCC2P18074 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ERCC2P18074 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
ERCC2P18074 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
ERCC2P18074 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.39■□□□□ 0.05
ERCC2P18074 AC131206.1-201ENST00000538078 1211 ntBASIC15.39■□□□□ 0.05
ERCC2P18074 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.39■□□□□ 0.05
ERCC2P18074 AC106820.3-201ENST00000561653 397 ntBASIC15.39■□□□□ 0.05
ERCC2P18074 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.39■□□□□ 0.05
ERCC2P18074 AC106886.1-201ENST00000568660 600 ntBASIC15.39■□□□□ 0.05
ERCC2P18074 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.39■□□□□ 0.05
ERCC2P18074 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.39■□□□□ 0.05
ERCC2P18074 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
ERCC2P18074 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ERCC2P18074 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
ERCC2P18074 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.39■□□□□ 0.05
ERCC2P18074 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.39■□□□□ 0.05
ERCC2P18074 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.39■□□□□ 0.05
ERCC2P18074 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ERCC2P18074 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
ERCC2P18074 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ERCC2P18074 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ERCC2P18074 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
ERCC2P18074 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ERCC2P18074 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ERCC2P18074 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ERCC2P18074 AC097359.2-201ENST00000604992 2389 ntBASIC15.38■□□□□ 0.05
ERCC2P18074 AC023908.3-201ENST00000564211 3047 ntBASIC15.38■□□□□ 0.05
ERCC2P18074 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.38■□□□□ 0.05
ERCC2P18074 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
ERCC2P18074 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.38■□□□□ 0.05
ERCC2P18074 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
ERCC2P18074 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.38■□□□□ 0.05
ERCC2P18074 U91328.1-201ENST00000437528 223 ntBASIC15.38■□□□□ 0.05
ERCC2P18074 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ERCC2P18074 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ERCC2P18074 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.38■□□□□ 0.05
ERCC2P18074 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.38■□□□□ 0.05
ERCC2P18074 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.38■□□□□ 0.05
ERCC2P18074 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
ERCC2P18074 AL162274.1-201ENST00000617191 1098 ntBASIC15.38■□□□□ 0.05
ERCC2P18074 AC138951.2-201ENST00000623455 1161 ntBASIC15.38■□□□□ 0.05
ERCC2P18074 AP001267.2-201ENST00000532619 2086 ntBASIC15.38■□□□□ 0.05
ERCC2P18074 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
ERCC2P18074 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ERCC2P18074 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
ERCC2P18074 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ERCC2P18074 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ERCC2P18074 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ERCC2P18074 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ERCC2P18074 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ERCC2P18074 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms