Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.41□□□□□ -0.1
SP9P0CG40 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.41□□□□□ -0.1
SP9P0CG40 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.41□□□□□ -0.1
SP9P0CG40 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.41□□□□□ -0.1
SP9P0CG40 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.41□□□□□ -0.1
SP9P0CG40 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SP9P0CG40 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.41□□□□□ -0.1
SP9P0CG40 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.41□□□□□ -0.1
SP9P0CG40 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.41□□□□□ -0.1
SP9P0CG40 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SP9P0CG40 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.4□□□□□ -0.1
SP9P0CG40 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SP9P0CG40 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.4□□□□□ -0.1
SP9P0CG40 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.4□□□□□ -0.1
SP9P0CG40 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SP9P0CG40 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.4□□□□□ -0.1
SP9P0CG40 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SP9P0CG40 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
SP9P0CG40 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SP9P0CG40 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.4□□□□□ -0.1
SP9P0CG40 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC14.4□□□□□ -0.1
SP9P0CG40 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.4□□□□□ -0.1
SP9P0CG40 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 ST13P19-201ENST00000442505 1124 ntBASIC14.4□□□□□ -0.1
SP9P0CG40 HNRNPA1P42-201ENST00000458678 957 ntBASIC14.4□□□□□ -0.1
SP9P0CG40 AC006529.1-201ENST00000459978 637 ntBASIC14.4□□□□□ -0.1
SP9P0CG40 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.4□□□□□ -0.1
SP9P0CG40 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.4□□□□□ -0.1
SP9P0CG40 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.4□□□□□ -0.1
SP9P0CG40 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.4□□□□□ -0.1
SP9P0CG40 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.4□□□□□ -0.1
SP9P0CG40 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SP9P0CG40 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.4□□□□□ -0.1
SP9P0CG40 AC013553.1-201ENST00000560906 267 ntBASIC14.4□□□□□ -0.1
SP9P0CG40 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC14.4□□□□□ -0.1
SP9P0CG40 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.4□□□□□ -0.1
SP9P0CG40 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SP9P0CG40 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.4□□□□□ -0.1
SP9P0CG40 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 AL160191.2-201ENST00000603975 601 ntBASIC14.4□□□□□ -0.1
SP9P0CG40 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SP9P0CG40 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 PCDHB19P-201ENST00000570871 2371 ntBASIC14.4□□□□□ -0.1
SP9P0CG40 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SP9P0CG40 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SP9P0CG40 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.4□□□□□ -0.1
SP9P0CG40 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SP9P0CG40 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.4□□□□□ -0.1
SP9P0CG40 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
SP9P0CG40 PCDHA12-202ENST00000613593 2588 ntBASIC14.39□□□□□ -0.11
SP9P0CG40 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.39□□□□□ -0.11
SP9P0CG40 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.39□□□□□ -0.11
SP9P0CG40 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SP9P0CG40 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SP9P0CG40 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SP9P0CG40 WASH3P-207ENST00000560956 1394 ntBASIC14.39□□□□□ -0.11
SP9P0CG40 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.39□□□□□ -0.11
SP9P0CG40 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 RNVU1-8-201ENST00000364272 125 ntBASIC14.39□□□□□ -0.11
SP9P0CG40 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC14.39□□□□□ -0.11
SP9P0CG40 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SP9P0CG40 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms