Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM3P06753 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.85■□□□□ 0.29
TPM3P06753 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM3P06753 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TPM3P06753 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TPM3P06753 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM3P06753 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TPM3P06753 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM3P06753 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TPM3P06753 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 AC015922.1-201ENST00000421102 1152 ntBASIC16.85■□□□□ 0.29
TPM3P06753 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.85■□□□□ 0.29
TPM3P06753 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM3P06753 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.85■□□□□ 0.29
TPM3P06753 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.85■□□□□ 0.29
TPM3P06753 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
TPM3P06753 AL133215.2-201ENST00000609242 977 ntBASIC16.85■□□□□ 0.29
TPM3P06753 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM3P06753 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
TPM3P06753 BX640515.1-201ENST00000617215 977 ntBASIC16.85■□□□□ 0.29
TPM3P06753 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TPM3P06753 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TPM3P06753 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TPM3P06753 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TPM3P06753 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TPM3P06753 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TPM3P06753 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TPM3P06753 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM3P06753 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.85■□□□□ 0.29
TPM3P06753 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM3P06753 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TPM3P06753 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
TPM3P06753 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC16.84■□□□□ 0.29
TPM3P06753 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TPM3P06753 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.84■□□□□ 0.29
TPM3P06753 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 AC074338.1-201ENST00000416825 156 ntBASIC16.84■□□□□ 0.29
TPM3P06753 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.84■□□□□ 0.29
TPM3P06753 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.84■□□□□ 0.29
TPM3P06753 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.84■□□□□ 0.29
TPM3P06753 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TPM3P06753 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.84■□□□□ 0.29
TPM3P06753 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.84■□□□□ 0.29
TPM3P06753 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TPM3P06753 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TPM3P06753 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 MIR193BHG-211ENST00000641433 5365 ntBASIC16.84■□□□□ 0.29
TPM3P06753 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TPM3P06753 AGGF1P1-201ENST00000509500 2073 ntBASIC16.84■□□□□ 0.29
TPM3P06753 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.84■□□□□ 0.29
TPM3P06753 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM3P06753 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.84■□□□□ 0.29
TPM3P06753 STK40-201ENST00000359297 4837 ntTSL 2 BASIC16.84■□□□□ 0.29
TPM3P06753 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TPM3P06753 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
TPM3P06753 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TPM3P06753 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TPM3P06753 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TPM3P06753 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.83■□□□□ 0.28
TPM3P06753 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms