Protein–RNA interactions for Protein: P05165

PCCA, Propionyl-CoA carboxylase alpha chain, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCAP05165 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCCAP05165 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 AJ011931.1-201ENST00000618749 2492 ntBASIC18.32■□□□□ 0.52
PCCAP05165 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.32■□□□□ 0.52
PCCAP05165 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCCAP05165 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCCAP05165 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.32■□□□□ 0.52
PCCAP05165 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.32■□□□□ 0.52
PCCAP05165 PRKXP1-201ENST00000561423 1122 ntBASIC18.32■□□□□ 0.52
PCCAP05165 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.32■□□□□ 0.52
PCCAP05165 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.32■□□□□ 0.52
PCCAP05165 AC126177.1-201ENST00000547829 2218 ntBASIC18.32■□□□□ 0.52
PCCAP05165 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.32■□□□□ 0.52
PCCAP05165 TCAF2P1-201ENST00000291129 2421 ntBASIC18.32■□□□□ 0.52
PCCAP05165 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCCAP05165 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.32■□□□□ 0.52
PCCAP05165 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCCAP05165 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.31■□□□□ 0.52
PCCAP05165 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.31■□□□□ 0.52
PCCAP05165 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.31■□□□□ 0.52
PCCAP05165 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCCAP05165 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 AHCYP4-201ENST00000419201 1315 ntBASIC18.31■□□□□ 0.52
PCCAP05165 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCCAP05165 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PCCAP05165 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.31■□□□□ 0.52
PCCAP05165 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 HINT2P1-201ENST00000419438 481 ntBASIC18.31■□□□□ 0.52
PCCAP05165 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.31■□□□□ 0.52
PCCAP05165 OR2R1P-201ENST00000441404 914 ntBASIC18.31■□□□□ 0.52
PCCAP05165 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.31■□□□□ 0.52
PCCAP05165 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.31■□□□□ 0.52
PCCAP05165 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.31■□□□□ 0.52
PCCAP05165 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.31■□□□□ 0.52
PCCAP05165 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PCCAP05165 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.31■□□□□ 0.52
PCCAP05165 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.31■□□□□ 0.52
PCCAP05165 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.31■□□□□ 0.52
PCCAP05165 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.31■□□□□ 0.52
PCCAP05165 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.31■□□□□ 0.52
PCCAP05165 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
PCCAP05165 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.31■□□□□ 0.52
PCCAP05165 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.31■□□□□ 0.52
PCCAP05165 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.31■□□□□ 0.52
PCCAP05165 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCCAP05165 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCCAP05165 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.31■□□□□ 0.52
PCCAP05165 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCCAP05165 LINC01165-201ENST00000445190 1623 ntBASIC18.31■□□□□ 0.52
PCCAP05165 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.31■□□□□ 0.52
PCCAP05165 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCCAP05165 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCCAP05165 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
PCCAP05165 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCCAP05165 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCCAP05165 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PCCAP05165 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.3■□□□□ 0.52
PCCAP05165 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PCCAP05165 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCCAP05165 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCCAP05165 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms