Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHGBP05060 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHGBP05060 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHGBP05060 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHGBP05060 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHGBP05060 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CHGBP05060 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 AL390755.1-201ENST00000623716 2027 ntBASIC17.88■□□□□ 0.45
CHGBP05060 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.88■□□□□ 0.45
CHGBP05060 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.88■□□□□ 0.45
CHGBP05060 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CHGBP05060 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CHGBP05060 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CHGBP05060 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.88■□□□□ 0.45
CHGBP05060 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.88■□□□□ 0.45
CHGBP05060 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.88■□□□□ 0.45
CHGBP05060 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.88■□□□□ 0.45
CHGBP05060 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.88■□□□□ 0.45
CHGBP05060 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.88■□□□□ 0.45
CHGBP05060 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.88■□□□□ 0.45
CHGBP05060 AC009955.4-201ENST00000597192 544 ntBASIC17.88■□□□□ 0.45
CHGBP05060 GPR182-203ENST00000622922 591 ntBASIC17.88■□□□□ 0.45
CHGBP05060 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 AL136172.1-201ENST00000598590 1394 ntBASIC17.88■□□□□ 0.45
CHGBP05060 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CHGBP05060 AC005912.2-201ENST00000619492 2400 ntBASIC17.88■□□□□ 0.45
CHGBP05060 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHGBP05060 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHGBP05060 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHGBP05060 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CHGBP05060 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CHGBP05060 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
CHGBP05060 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.87■□□□□ 0.45
CHGBP05060 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.87■□□□□ 0.45
CHGBP05060 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.87■□□□□ 0.45
CHGBP05060 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.87■□□□□ 0.45
CHGBP05060 AC091271.1-201ENST00000611877 1162 ntBASIC17.87■□□□□ 0.45
CHGBP05060 MIR6869-201ENST00000619434 62 ntBASIC17.87■□□□□ 0.45
CHGBP05060 MIR6799-201ENST00000620297 69 ntBASIC17.87■□□□□ 0.45
CHGBP05060 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.87■□□□□ 0.45
CHGBP05060 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
CHGBP05060 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.87■□□□□ 0.45
CHGBP05060 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.87■□□□□ 0.45
CHGBP05060 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.87■□□□□ 0.45
CHGBP05060 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.87■□□□□ 0.45
CHGBP05060 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.87■□□□□ 0.45
CHGBP05060 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CHGBP05060 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHGBP05060 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.86■□□□□ 0.45
CHGBP05060 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHGBP05060 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CHGBP05060 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CHGBP05060 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.86■□□□□ 0.45
CHGBP05060 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHGBP05060 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms