Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 SAMD11P1-201ENST00000571429 661 ntBASIC12.95□□□□□ -0.34
HLA-DQB1P01920 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 AC074044.1-201ENST00000609673 707 ntBASIC12.95□□□□□ -0.34
HLA-DQB1P01920 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 AC135782.3-201ENST00000562782 2105 ntBASIC12.95□□□□□ -0.34
HLA-DQB1P01920 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HLA-DQB1P01920 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 POM121L14P-201ENST00000406100 1558 ntBASIC12.94□□□□□ -0.34
HLA-DQB1P01920 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 UXT-AS1-201ENST00000590504 1525 ntBASIC12.94□□□□□ -0.34
HLA-DQB1P01920 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 SLC25A1P1-201ENST00000528351 927 ntBASIC12.94□□□□□ -0.34
HLA-DQB1P01920 SLC25A39P2-201ENST00000537614 270 ntBASIC12.94□□□□□ -0.34
HLA-DQB1P01920 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 PCDHB18P-202ENST00000526308 3197 ntBASIC12.94□□□□□ -0.34
HLA-DQB1P01920 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 AL157414.3-201ENST00000624276 1954 ntBASIC12.94□□□□□ -0.34
HLA-DQB1P01920 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
HLA-DQB1P01920 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms