Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.02□□□□□ -0.33
CCNKO75909 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CCNKO75909 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CCNKO75909 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.02□□□□□ -0.33
CCNKO75909 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.02□□□□□ -0.33
CCNKO75909 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.02□□□□□ -0.33
CCNKO75909 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CCNKO75909 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.02□□□□□ -0.33
CCNKO75909 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.02□□□□□ -0.33
CCNKO75909 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.02□□□□□ -0.33
CCNKO75909 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.02□□□□□ -0.33
CCNKO75909 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
CCNKO75909 TNRC18P1-201ENST00000502875 3650 ntBASIC13.02□□□□□ -0.33
CCNKO75909 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CCNKO75909 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.02□□□□□ -0.33
CCNKO75909 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.02□□□□□ -0.33
CCNKO75909 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CCNKO75909 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.02□□□□□ -0.33
CCNKO75909 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.02□□□□□ -0.33
CCNKO75909 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCNKO75909 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CCNKO75909 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.02□□□□□ -0.33
CCNKO75909 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.01□□□□□ -0.33
CCNKO75909 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.01□□□□□ -0.33
CCNKO75909 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.01□□□□□ -0.33
CCNKO75909 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.01□□□□□ -0.33
CCNKO75909 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCNKO75909 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CCNKO75909 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CCNKO75909 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.01□□□□□ -0.33
CCNKO75909 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.01□□□□□ -0.33
CCNKO75909 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.01□□□□□ -0.33
CCNKO75909 GHSR-202ENST00000427970 912 ntBASIC13.01□□□□□ -0.33
CCNKO75909 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.01□□□□□ -0.33
CCNKO75909 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.01□□□□□ -0.33
CCNKO75909 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.01□□□□□ -0.33
CCNKO75909 AC138894.3-201ENST00000603787 634 ntBASIC13.01□□□□□ -0.33
CCNKO75909 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.01□□□□□ -0.33
CCNKO75909 AC004706.3-202ENST00000621574 984 ntBASIC13.01□□□□□ -0.33
CCNKO75909 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.01□□□□□ -0.33
CCNKO75909 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.01□□□□□ -0.33
CCNKO75909 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.01□□□□□ -0.33
CCNKO75909 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.01□□□□□ -0.33
CCNKO75909 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CCNKO75909 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CCNKO75909 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.01□□□□□ -0.33
CCNKO75909 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCNKO75909 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.01□□□□□ -0.33
CCNKO75909 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCNKO75909 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCNKO75909 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCNKO75909 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCNKO75909 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CCNKO75909 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CCNKO75909 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms