Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.08□□□□□ -0.32
XRCC2O43543 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
XRCC2O43543 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 AC138969.2-201ENST00000532739 9932 ntBASIC13.08□□□□□ -0.32
XRCC2O43543 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
XRCC2O43543 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 KLF2P2-201ENST00000416807 1039 ntBASIC13.08□□□□□ -0.32
XRCC2O43543 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 AC098850.1-201ENST00000419919 790 ntBASIC13.08□□□□□ -0.32
XRCC2O43543 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.08□□□□□ -0.32
XRCC2O43543 AC002472.2-201ENST00000442739 958 ntBASIC13.08□□□□□ -0.32
XRCC2O43543 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.08□□□□□ -0.32
XRCC2O43543 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.08□□□□□ -0.32
XRCC2O43543 API5-211ENST00000534695 560 ntTSL 5 BASIC13.08□□□□□ -0.32
XRCC2O43543 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.08□□□□□ -0.32
XRCC2O43543 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.08□□□□□ -0.32
XRCC2O43543 RN7SL204P-201ENST00000582831 262 ntBASIC13.08□□□□□ -0.32
XRCC2O43543 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.08□□□□□ -0.32
XRCC2O43543 CHCHD2P3-201ENST00000603038 451 ntBASIC13.08□□□□□ -0.32
XRCC2O43543 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
XRCC2O43543 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.08□□□□□ -0.32
XRCC2O43543 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.08□□□□□ -0.32
XRCC2O43543 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.08□□□□□ -0.32
XRCC2O43543 AC018529.2-202ENST00000611482 3087 ntBASIC13.08□□□□□ -0.32
XRCC2O43543 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.08□□□□□ -0.32
XRCC2O43543 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.08□□□□□ -0.32
XRCC2O43543 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.08□□□□□ -0.32
XRCC2O43543 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
XRCC2O43543 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.07□□□□□ -0.32
XRCC2O43543 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.07□□□□□ -0.32
XRCC2O43543 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.07□□□□□ -0.32
XRCC2O43543 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 ACKR1-201ENST00000368121 1240 ntBASIC13.07□□□□□ -0.32
XRCC2O43543 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
XRCC2O43543 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
XRCC2O43543 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.07□□□□□ -0.32
XRCC2O43543 ACTBP8-201ENST00000403258 1108 ntBASIC13.07□□□□□ -0.32
XRCC2O43543 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.07□□□□□ -0.32
XRCC2O43543 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.07□□□□□ -0.32
XRCC2O43543 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.07□□□□□ -0.32
XRCC2O43543 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.07□□□□□ -0.32
XRCC2O43543 GIMAP3P-201ENST00000495150 836 ntBASIC13.07□□□□□ -0.32
XRCC2O43543 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.07□□□□□ -0.32
XRCC2O43543 TERF1P3-201ENST00000505638 1227 ntBASIC13.07□□□□□ -0.32
XRCC2O43543 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.07□□□□□ -0.32
XRCC2O43543 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
XRCC2O43543 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.07□□□□□ -0.32
XRCC2O43543 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.07□□□□□ -0.32
XRCC2O43543 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 AP001063.1-201ENST00000568332 529 ntBASIC13.07□□□□□ -0.32
XRCC2O43543 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.07□□□□□ -0.32
XRCC2O43543 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.07□□□□□ -0.32
XRCC2O43543 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.07□□□□□ -0.32
XRCC2O43543 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.07□□□□□ -0.32
XRCC2O43543 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.07□□□□□ -0.32
XRCC2O43543 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.07□□□□□ -0.32
XRCC2O43543 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.07□□□□□ -0.32
XRCC2O43543 AC023090.2-201ENST00000625182 2110 ntBASIC13.07□□□□□ -0.32
XRCC2O43543 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
XRCC2O43543 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
XRCC2O43543 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
XRCC2O43543 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms