Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.87■□□□□ 0.45
RNF113AO15541 AC008825.2-201ENST00000603374 718 ntBASIC17.87■□□□□ 0.45
RNF113AO15541 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF113AO15541 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF113AO15541 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF113AO15541 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF113AO15541 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF113AO15541 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RNF113AO15541 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF113AO15541 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF113AO15541 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.86■□□□□ 0.45
RNF113AO15541 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.86■□□□□ 0.45
RNF113AO15541 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.86■□□□□ 0.45
RNF113AO15541 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF113AO15541 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 Z93015.1-201ENST00000451718 390 ntBASIC17.86■□□□□ 0.45
RNF113AO15541 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF113AO15541 RPSAP36-202ENST00000494591 1261 ntBASIC17.86■□□□□ 0.45
RNF113AO15541 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF113AO15541 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF113AO15541 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.86■□□□□ 0.45
RNF113AO15541 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 REXO1L6P-201ENST00000603433 1515 ntBASIC17.86■□□□□ 0.45
RNF113AO15541 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 SHC1P1-201ENST00000425230 1745 ntBASIC17.86■□□□□ 0.45
RNF113AO15541 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF113AO15541 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF113AO15541 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF113AO15541 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RNF113AO15541 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RNF113AO15541 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF113AO15541 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF113AO15541 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF113AO15541 MIR326-201ENST00000362220 95 ntBASIC17.85■□□□□ 0.45
RNF113AO15541 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
RNF113AO15541 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
RNF113AO15541 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF113AO15541 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF113AO15541 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
RNF113AO15541 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RNF113AO15541 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RNF113AO15541 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF113AO15541 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF113AO15541 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
RNF113AO15541 AC103988.2-201ENST00000561804 725 ntBASIC17.85■□□□□ 0.45
RNF113AO15541 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF113AO15541 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF113AO15541 MIR4783-201ENST00000580343 82 ntBASIC17.85■□□□□ 0.45
RNF113AO15541 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF113AO15541 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
RNF113AO15541 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF113AO15541 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RNF113AO15541 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF113AO15541 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF113AO15541 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF113AO15541 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF113AO15541 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF113AO15541 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF113AO15541 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF113AO15541 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF113AO15541 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF113AO15541 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms