Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AP001267.2-201ENST00000532619 2086 ntBASIC15.26■□□□□ 0.03
CCDC78A2IDD5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 AL391825.1-201ENST00000457671 1364 ntBASIC15.25■□□□□ 0.03
CCDC78A2IDD5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 AC133539.2-201ENST00000604757 467 ntBASIC15.25■□□□□ 0.03
CCDC78A2IDD5 WFDC1-204ENST00000613603 549 ntBASIC15.25■□□□□ 0.03
CCDC78A2IDD5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
CCDC78A2IDD5 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 AL442647.2-201ENST00000429864 857 ntBASIC15.24■□□□□ 0.03
CCDC78A2IDD5 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 AC005252.2-201ENST00000624630 1141 ntBASIC15.24■□□□□ 0.03
CCDC78A2IDD5 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC78A2IDD5 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms