Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 AC006033.1-201ENST00000440505 426 ntBASIC14.11□□□□□ -0.15
CTSFQ9UBX1 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 AL022328.3-201ENST00000607943 679 ntBASIC14.11□□□□□ -0.15
CTSFQ9UBX1 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.11□□□□□ -0.15
CTSFQ9UBX1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 AC018735.1-201ENST00000437208 1502 ntBASIC14.1□□□□□ -0.15
CTSFQ9UBX1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 RN7SKP230-201ENST00000365642 335 ntBASIC14.1□□□□□ -0.15
CTSFQ9UBX1 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 MIR1247-201ENST00000408206 136 ntBASIC14.1□□□□□ -0.15
CTSFQ9UBX1 MIR663B-201ENST00000408361 115 ntBASIC14.1□□□□□ -0.15
CTSFQ9UBX1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTSFQ9UBX1 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 AC126755.1-201ENST00000525846 6405 ntBASIC14.09□□□□□ -0.15
CTSFQ9UBX1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.09□□□□□ -0.15
CTSFQ9UBX1 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.09□□□□□ -0.15
CTSFQ9UBX1 GPAA1P2-201ENST00000417923 928 ntBASIC14.09□□□□□ -0.15
CTSFQ9UBX1 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms