Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SSR4P1-203ENST00000599569 2260 ntBASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 INTS4P2-202ENST00000614726 2019 ntBASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 ZBTB45P1-201ENST00000452761 1456 ntBASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 KRT18P64-201ENST00000434946 1219 ntBASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 AL162726.2-201ENST00000438986 1017 ntBASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 MYCLP2-201ENST00000449268 967 ntBASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 MIR3197-201ENST00000582241 73 ntBASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 RN7SL204P-201ENST00000582831 262 ntBASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 AC007431.3-201ENST00000623221 587 ntBASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 AL603764.1-201ENST00000636452 321 ntBASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 STRCP1-201ENST00000509801 5328 ntBASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 AC027601.5-201ENST00000624065 2482 ntBASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LINC00474Q9P2X8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC9.87□□□□□ -0.83
LINC00474Q9P2X8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms