Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 SPDYE11-202ENST00000450699 704 ntBASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 SPDYE9P-201ENST00000570642 692 ntBASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 SPDYE10P-202ENST00000612005 668 ntBASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 SPDYE8P-202ENST00000612377 668 ntBASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 AC091812.2-201ENST00000619081 385 ntBASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 AC099521.3-201ENST00000624251 2938 ntBASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 PPT1-213ENST00000641319 2388 ntBASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 TP73-203ENST00000357733 4899 ntTSL 5 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 HNRNPA1P28-201ENST00000424481 961 ntBASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 SPCS2P4-201ENST00000436160 681 ntBASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 KRT8P23-201ENST00000560090 1207 ntBASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 AC243562.1-201ENST00000560672 389 ntBASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 AC092865.6-201ENST00000642101 219 ntBASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms